Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav10A0A075B642 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav10A0A075B642 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.26■□□□□ 0.35
Trav10A0A075B642 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav10A0A075B642 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Trav10A0A075B642 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Trav10A0A075B642 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav10A0A075B642 AA386476-201ENSMUST00000098781 1665 ntBASIC17.26■□□□□ 0.35
Trav10A0A075B642 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav10A0A075B642 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav10A0A075B642 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.26■□□□□ 0.35
Trav10A0A075B642 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav10A0A075B642 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav10A0A075B642 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav10A0A075B642 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav10A0A075B642 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav10A0A075B642 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.25■□□□□ 0.35
Trav10A0A075B642 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav10A0A075B642 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav10A0A075B642 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav10A0A075B642 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav10A0A075B642 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav10A0A075B642 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav10A0A075B642 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav10A0A075B642 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav10A0A075B642 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav10A0A075B642 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav10A0A075B642 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav10A0A075B642 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav10A0A075B642 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav10A0A075B642 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav10A0A075B642 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav10A0A075B642 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav10A0A075B642 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.24■□□□□ 0.35
Trav10A0A075B642 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Trav10A0A075B642 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.24■□□□□ 0.35
Trav10A0A075B642 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav10A0A075B642 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav10A0A075B642 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trav10A0A075B642 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav10A0A075B642 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trav10A0A075B642 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trav10A0A075B642 Gm27454-201ENSMUST00000185090 204 ntBASIC17.23■□□□□ 0.35
Trav10A0A075B642 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.23■□□□□ 0.35
Trav10A0A075B642 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.23■□□□□ 0.35
Trav10A0A075B642 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav10A0A075B642 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav10A0A075B642 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.23■□□□□ 0.35
Trav10A0A075B642 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav10A0A075B642 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav10A0A075B642 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav10A0A075B642 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav10A0A075B642 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav10A0A075B642 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav10A0A075B642 Gm12821-201ENSMUST00000120022 600 ntBASIC17.22■□□□□ 0.35
Trav10A0A075B642 Spcs1-204ENSMUST00000226782 949 ntBASIC17.22■□□□□ 0.35
Trav10A0A075B642 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav10A0A075B642 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav10A0A075B642 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav10A0A075B642 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav10A0A075B642 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trav10A0A075B642 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Trav10A0A075B642 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav10A0A075B642 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav10A0A075B642 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav10A0A075B642 Gm12251-201ENSMUST00000117893 792 ntBASIC17.21■□□□□ 0.35
Trav10A0A075B642 Mir7075-201ENSMUST00000184187 82 ntBASIC17.21■□□□□ 0.35
Trav10A0A075B642 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trav10A0A075B642 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Trav10A0A075B642 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav10A0A075B642 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav10A0A075B642 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav10A0A075B642 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav10A0A075B642 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
Trav10A0A075B642 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav10A0A075B642 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav10A0A075B642 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trav10A0A075B642 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav10A0A075B642 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav10A0A075B642 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav10A0A075B642 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav10A0A075B642 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav10A0A075B642 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav10A0A075B642 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav10A0A075B642 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Trav10A0A075B642 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav10A0A075B642 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms