Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1S4R1E0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1S4R1E0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1S4R1E0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1S4R1E0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1S4R1E0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
H2afb1S4R1E0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1S4R1E0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1S4R1E0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1S4R1E0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
H2afb1S4R1E0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1S4R1E0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
H2afb1S4R1E0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb1S4R1E0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb1S4R1E0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
H2afb1S4R1E0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.63■□□□□ 0.41
H2afb1S4R1E0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.63■□□□□ 0.41
H2afb1S4R1E0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
H2afb1S4R1E0 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.63■□□□□ 0.41
H2afb1S4R1E0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb1S4R1E0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
H2afb1S4R1E0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb1S4R1E0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb1S4R1E0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
H2afb1S4R1E0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.62■□□□□ 0.41
H2afb1S4R1E0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb1S4R1E0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
H2afb1S4R1E0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb1S4R1E0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb1S4R1E0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
H2afb1S4R1E0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb1S4R1E0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.61■□□□□ 0.41
H2afb1S4R1E0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
H2afb1S4R1E0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
H2afb1S4R1E0 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.61■□□□□ 0.41
H2afb1S4R1E0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
H2afb1S4R1E0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb1S4R1E0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb1S4R1E0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb1S4R1E0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1S4R1E0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1S4R1E0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1S4R1E0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
H2afb1S4R1E0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1S4R1E0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
H2afb1S4R1E0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1S4R1E0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1S4R1E0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1S4R1E0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1S4R1E0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1S4R1E0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1S4R1E0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
H2afb1S4R1E0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
H2afb1S4R1E0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
H2afb1S4R1E0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.58■□□□□ 0.4
H2afb1S4R1E0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.58■□□□□ 0.4
H2afb1S4R1E0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
H2afb1S4R1E0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.58■□□□□ 0.4
H2afb1S4R1E0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb1S4R1E0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
H2afb1S4R1E0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb1S4R1E0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1S4R1E0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1S4R1E0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1S4R1E0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1S4R1E0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
H2afb1S4R1E0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1S4R1E0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1S4R1E0 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.57■□□□□ 0.4
H2afb1S4R1E0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1S4R1E0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1S4R1E0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms