Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 DUX4L2-201ENST00000561772 1275 ntBASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 AC022517.1-201ENST00000592429 346 ntBASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 DUX4L6-201ENST00000626483 1275 ntBASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 DUX4L1-201ENST00000627662 1275 ntBASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 DUX4L8-201ENST00000629013 1275 ntBASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 DUX4L3-201ENST00000630187 1275 ntBASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 DUX4L7-201ENST00000630678 1275 ntBASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 DUX4L5-201ENST00000630834 1275 ntBASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA3Q9Y5H0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 OR2I1P-207ENST00000453522 948 ntBASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 AC012414.1-201ENST00000556676 535 ntBASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGA3Q9Y5H0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 DUX4L4-201ENST00000566884 1269 ntBASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA3Q9Y5H0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGA3Q9Y5H0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA3Q9Y5H0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGA3Q9Y5H0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
PCDHGA3Q9Y5H0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PCDHGA3Q9Y5H0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA3Q9Y5H0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.22■□□□□ 0.99
PCDHGA3Q9Y5H0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA3Q9Y5H0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA3Q9Y5H0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA3Q9Y5H0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 RARRES2P11-201ENST00000635158 484 ntBASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDHGA3Q9Y5H0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHGA3Q9Y5H0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA3Q9Y5H0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA3Q9Y5H0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA3Q9Y5H0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHGA3Q9Y5H0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms