Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx6Q9R1R0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx6Q9R1R0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx6Q9R1R0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.21■□□□□ 0.51
Lhx6Q9R1R0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx6Q9R1R0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx6Q9R1R0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx6Q9R1R0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx6Q9R1R0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lhx6Q9R1R0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx6Q9R1R0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Lhx6Q9R1R0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx6Q9R1R0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx6Q9R1R0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lhx6Q9R1R0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Lhx6Q9R1R0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lhx6Q9R1R0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.18■□□□□ 0.5
Lhx6Q9R1R0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx6Q9R1R0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.18■□□□□ 0.5
Lhx6Q9R1R0 Gm43530-201ENSMUST00000195920 274 ntBASIC18.18■□□□□ 0.5
Lhx6Q9R1R0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Lhx6Q9R1R0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx6Q9R1R0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx6Q9R1R0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx6Q9R1R0 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.18■□□□□ 0.5
Lhx6Q9R1R0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lhx6Q9R1R0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Gm11421-201ENSMUST00000122124 294 ntBASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Lhx6Q9R1R0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Gm7514-201ENSMUST00000209475 934 ntBASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx6Q9R1R0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx6Q9R1R0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx6Q9R1R0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.15■□□□□ 0.5
Lhx6Q9R1R0 Gm13234-201ENSMUST00000120010 747 ntBASIC18.15■□□□□ 0.5
Lhx6Q9R1R0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.15■□□□□ 0.5
Lhx6Q9R1R0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.15■□□□□ 0.5
Lhx6Q9R1R0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx6Q9R1R0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx6Q9R1R0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx6Q9R1R0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx6Q9R1R0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx6Q9R1R0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms