Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CDH20Q9HBT6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CDH20Q9HBT6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH20Q9HBT6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.17■□□□□ 0.66
CDH20Q9HBT6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.17■□□□□ 0.66
CDH20Q9HBT6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH20Q9HBT6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDH20Q9HBT6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH20Q9HBT6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
CDH20Q9HBT6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH20Q9HBT6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH20Q9HBT6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH20Q9HBT6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 MIR4767-201ENST00000582827 78 ntBASIC19.15■□□□□ 0.66
CDH20Q9HBT6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 AC106739.1-201ENST00000617035 715 ntBASIC19.15■□□□□ 0.66
CDH20Q9HBT6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH20Q9HBT6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.14■□□□□ 0.66
CDH20Q9HBT6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDH20Q9HBT6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH20Q9HBT6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH20Q9HBT6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH20Q9HBT6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH20Q9HBT6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH20Q9HBT6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH20Q9HBT6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH20Q9HBT6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH20Q9HBT6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH20Q9HBT6 AC079834.2-201ENST00000609776 1949 ntBASIC19.13■□□□□ 0.65
CDH20Q9HBT6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 CLDN5-201ENST00000403084 2357 ntBASIC19.13■□□□□ 0.65
CDH20Q9HBT6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH20Q9HBT6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH20Q9HBT6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH20Q9HBT6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH20Q9HBT6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CDH20Q9HBT6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH20Q9HBT6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CDH20Q9HBT6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CDH20Q9HBT6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH20Q9HBT6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH20Q9HBT6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH20Q9HBT6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH20Q9HBT6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH20Q9HBT6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH20Q9HBT6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms