Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Nkx2-4Q9EQM3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nkx2-4Q9EQM3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nkx2-4Q9EQM3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-4Q9EQM3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-4Q9EQM3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-4Q9EQM3 Gm26524-201ENSMUST00000192339 390 ntBASIC20.2■□□□□ 0.82
Nkx2-4Q9EQM3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-4Q9EQM3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-4Q9EQM3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-4Q9EQM3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-4Q9EQM3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-4Q9EQM3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-4Q9EQM3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nkx2-4Q9EQM3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.2■□□□□ 0.82
Nkx2-4Q9EQM3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-4Q9EQM3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.19■□□□□ 0.82
Nkx2-4Q9EQM3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-4Q9EQM3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-4Q9EQM3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.19■□□□□ 0.82
Nkx2-4Q9EQM3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-4Q9EQM3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nkx2-4Q9EQM3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Nkx2-4Q9EQM3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nkx2-4Q9EQM3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nkx2-4Q9EQM3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-4Q9EQM3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-4Q9EQM3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nkx2-4Q9EQM3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-4Q9EQM3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Nkx2-4Q9EQM3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-4Q9EQM3 Rab3c-203ENSMUST00000224180 967 ntBASIC20.18■□□□□ 0.82
Nkx2-4Q9EQM3 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.18■□□□□ 0.82
Nkx2-4Q9EQM3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-4Q9EQM3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-4Q9EQM3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nkx2-4Q9EQM3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-4Q9EQM3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-4Q9EQM3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-4Q9EQM3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-4Q9EQM3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-4Q9EQM3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-4Q9EQM3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-4Q9EQM3 Gm6576-201ENSMUST00000169678 883 ntBASIC20.16■□□□□ 0.82
Nkx2-4Q9EQM3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.16■□□□□ 0.82
Nkx2-4Q9EQM3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.16■□□□□ 0.82
Nkx2-4Q9EQM3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-4Q9EQM3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nkx2-4Q9EQM3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-4Q9EQM3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-4Q9EQM3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nkx2-4Q9EQM3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.15■□□□□ 0.82
Nkx2-4Q9EQM3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Nkx2-4Q9EQM3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Nkx2-4Q9EQM3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-4Q9EQM3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nkx2-4Q9EQM3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nkx2-4Q9EQM3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx2-4Q9EQM3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx2-4Q9EQM3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx2-4Q9EQM3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nkx2-4Q9EQM3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx2-4Q9EQM3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-4Q9EQM3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx2-4Q9EQM3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx2-4Q9EQM3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nkx2-4Q9EQM3 Gm12896-201ENSMUST00000118430 226 ntBASIC20.12■□□□□ 0.81
Nkx2-4Q9EQM3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Nkx2-4Q9EQM3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.12■□□□□ 0.81
Nkx2-4Q9EQM3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx2-4Q9EQM3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx2-4Q9EQM3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nkx2-4Q9EQM3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Nkx2-4Q9EQM3 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms