Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 LINC01960-201ENST00000563759 1884 ntBASIC21.53■■□□□ 1.04
LINC00615Q96LM1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00615Q96LM1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.53■■□□□ 1.04
LINC00615Q96LM1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.52■■□□□ 1.04
LINC00615Q96LM1 IGHV3-19-201ENST00000521488 291 ntBASIC21.52■■□□□ 1.04
LINC00615Q96LM1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00615Q96LM1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LINC00615Q96LM1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00615Q96LM1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00615Q96LM1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00615Q96LM1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
LINC00615Q96LM1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00615Q96LM1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00615Q96LM1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.51■■□□□ 1.03
LINC00615Q96LM1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.51■■□□□ 1.03
LINC00615Q96LM1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.51■■□□□ 1.03
LINC00615Q96LM1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00615Q96LM1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
LINC00615Q96LM1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
LINC00615Q96LM1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.5■■□□□ 1.03
LINC00615Q96LM1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
LINC00615Q96LM1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.5■■□□□ 1.03
LINC00615Q96LM1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00615Q96LM1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.5■■□□□ 1.03
LINC00615Q96LM1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.5■■□□□ 1.03
LINC00615Q96LM1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
LINC00615Q96LM1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00615Q96LM1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00615Q96LM1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.49■■□□□ 1.03
LINC00615Q96LM1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINC00615Q96LM1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINC00615Q96LM1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LINC00615Q96LM1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINC00615Q96LM1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINC00615Q96LM1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LINC00615Q96LM1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.49■■□□□ 1.03
LINC00615Q96LM1 AC010141.3-201ENST00000456659 717 ntBASIC21.49■■□□□ 1.03
LINC00615Q96LM1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LINC00615Q96LM1 AC087239.1-201ENST00000622671 572 ntBASIC21.49■■□□□ 1.03
LINC00615Q96LM1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.49■■□□□ 1.03
LINC00615Q96LM1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LINC00615Q96LM1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINC00615Q96LM1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINC00615Q96LM1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.48■■□□□ 1.03
LINC00615Q96LM1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
LINC00615Q96LM1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.48■■□□□ 1.03
LINC00615Q96LM1 AC087742.1-201ENST00000575880 1738 ntBASIC21.48■■□□□ 1.03
LINC00615Q96LM1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINC00615Q96LM1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINC00615Q96LM1 ESRRAP2-201ENST00000418437 1549 ntBASIC21.47■■□□□ 1.03
LINC00615Q96LM1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.47■■□□□ 1.03
LINC00615Q96LM1 AC105265.2-201ENST00000467189 838 ntBASIC21.47■■□□□ 1.03
LINC00615Q96LM1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LINC00615Q96LM1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LINC00615Q96LM1 TSPY26P-201ENST00000476365 1326 ntBASIC21.47■■□□□ 1.03
LINC00615Q96LM1 AC019069.1-201ENST00000610008 1333 ntBASIC21.47■■□□□ 1.03
LINC00615Q96LM1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
LINC00615Q96LM1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00615Q96LM1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00615Q96LM1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.46■■□□□ 1.03
LINC00615Q96LM1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00615Q96LM1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.46■■□□□ 1.03
LINC00615Q96LM1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00615Q96LM1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.46■■□□□ 1.03
LINC00615Q96LM1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00615Q96LM1 C9orf163-202ENST00000624034 2573 ntBASIC21.46■■□□□ 1.03
LINC00615Q96LM1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00615Q96LM1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00615Q96LM1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00615Q96LM1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
LINC00615Q96LM1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LINC00615Q96LM1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LINC00615Q96LM1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
LINC00615Q96LM1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
LINC00615Q96LM1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LINC00615Q96LM1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.45■■□□□ 1.02
LINC00615Q96LM1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LINC00615Q96LM1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LINC00615Q96LM1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LINC00615Q96LM1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.45■■□□□ 1.02
LINC00615Q96LM1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
LINC00615Q96LM1 OXCT2P1-201ENST00000447263 1535 ntBASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms