Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhb2Q91Y00 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb2Q91Y00 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb2Q91Y00 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb2Q91Y00 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb2Q91Y00 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb2Q91Y00 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhb2Q91Y00 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhb2Q91Y00 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhb2Q91Y00 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb2Q91Y00 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb2Q91Y00 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb2Q91Y00 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb2Q91Y00 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.75■□□□□ 0.91
Pcdhb2Q91Y00 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb2Q91Y00 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb2Q91Y00 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.75■□□□□ 0.91
Pcdhb2Q91Y00 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdhb2Q91Y00 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb2Q91Y00 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb2Q91Y00 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb2Q91Y00 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb2Q91Y00 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb2Q91Y00 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb2Q91Y00 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb2Q91Y00 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.74■□□□□ 0.91
Pcdhb2Q91Y00 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcdhb2Q91Y00 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Pcdhb2Q91Y00 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhb2Q91Y00 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdhb2Q91Y00 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdhb2Q91Y00 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdhb2Q91Y00 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdhb2Q91Y00 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb2Q91Y00 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb2Q91Y00 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdhb2Q91Y00 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb2Q91Y00 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb2Q91Y00 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb2Q91Y00 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhb2Q91Y00 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb2Q91Y00 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.72■□□□□ 0.91
Pcdhb2Q91Y00 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb2Q91Y00 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhb2Q91Y00 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb2Q91Y00 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb2Q91Y00 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb2Q91Y00 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Pcdhb2Q91Y00 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb2Q91Y00 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb2Q91Y00 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb2Q91Y00 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdhb2Q91Y00 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb2Q91Y00 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb2Q91Y00 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb2Q91Y00 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb2Q91Y00 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.7■□□□□ 0.9
Pcdhb2Q91Y00 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.7■□□□□ 0.9
Pcdhb2Q91Y00 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb2Q91Y00 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb2Q91Y00 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Pcdhb2Q91Y00 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb2Q91Y00 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb2Q91Y00 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb2Q91Y00 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdhb2Q91Y00 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.69■□□□□ 0.9
Pcdhb2Q91Y00 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdhb2Q91Y00 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb2Q91Y00 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb2Q91Y00 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb2Q91Y00 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb2Q91Y00 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb2Q91Y00 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb2Q91Y00 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdhb2Q91Y00 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb2Q91Y00 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb2Q91Y00 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pcdhb2Q91Y00 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb2Q91Y00 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Pcdhb2Q91Y00 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb2Q91Y00 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdhb2Q91Y00 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb2Q91Y00 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.67■□□□□ 0.9
Pcdhb2Q91Y00 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhb2Q91Y00 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms