Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpap2Q8VC34 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpap2Q8VC34 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.53■■□□□ 1.04
Rpap2Q8VC34 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpap2Q8VC34 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpap2Q8VC34 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Rpap2Q8VC34 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.52■■□□□ 1.04
Rpap2Q8VC34 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rpap2Q8VC34 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.52■■□□□ 1.04
Rpap2Q8VC34 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpap2Q8VC34 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rpap2Q8VC34 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpap2Q8VC34 Notumos-201ENSMUST00000151998 2659 ntBASIC21.52■■□□□ 1.03
Rpap2Q8VC34 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Rpap2Q8VC34 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpap2Q8VC34 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpap2Q8VC34 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.51■■□□□ 1.03
Rpap2Q8VC34 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpap2Q8VC34 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpap2Q8VC34 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rpap2Q8VC34 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.5■■□□□ 1.03
Rpap2Q8VC34 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rpap2Q8VC34 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rpap2Q8VC34 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.5■■□□□ 1.03
Rpap2Q8VC34 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpap2Q8VC34 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpap2Q8VC34 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.5■■□□□ 1.03
Rpap2Q8VC34 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rpap2Q8VC34 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpap2Q8VC34 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpap2Q8VC34 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpap2Q8VC34 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Rpap2Q8VC34 Smad6-203ENSMUST00000179458 273 ntBASIC21.49■■□□□ 1.03
Rpap2Q8VC34 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpap2Q8VC34 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpap2Q8VC34 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpap2Q8VC34 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.49■■□□□ 1.03
Rpap2Q8VC34 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpap2Q8VC34 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpap2Q8VC34 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Rpap2Q8VC34 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpap2Q8VC34 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpap2Q8VC34 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpap2Q8VC34 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rpap2Q8VC34 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rpap2Q8VC34 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.47■■□□□ 1.03
Rpap2Q8VC34 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpap2Q8VC34 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpap2Q8VC34 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Rpap2Q8VC34 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rpap2Q8VC34 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rpap2Q8VC34 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpap2Q8VC34 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Rpap2Q8VC34 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpap2Q8VC34 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpap2Q8VC34 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpap2Q8VC34 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpap2Q8VC34 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpap2Q8VC34 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rpap2Q8VC34 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpap2Q8VC34 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpap2Q8VC34 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpap2Q8VC34 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpap2Q8VC34 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Rpap2Q8VC34 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.03
Rpap2Q8VC34 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.45■■□□□ 1.02
Rpap2Q8VC34 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpap2Q8VC34 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.45■■□□□ 1.02
Rpap2Q8VC34 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rpap2Q8VC34 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rpap2Q8VC34 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpap2Q8VC34 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Rpap2Q8VC34 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Rpap2Q8VC34 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.44■■□□□ 1.02
Rpap2Q8VC34 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpap2Q8VC34 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpap2Q8VC34 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.44■■□□□ 1.02
Rpap2Q8VC34 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpap2Q8VC34 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpap2Q8VC34 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rpap2Q8VC34 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpap2Q8VC34 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpap2Q8VC34 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rpap2Q8VC34 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Rpap2Q8VC34 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpap2Q8VC34 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpap2Q8VC34 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms