Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ebf4Q8K4J2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf4Q8K4J2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.83■□□□□ 0.44
Ebf4Q8K4J2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf4Q8K4J2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf4Q8K4J2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf4Q8K4J2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf4Q8K4J2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf4Q8K4J2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.82■□□□□ 0.44
Ebf4Q8K4J2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf4Q8K4J2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ebf4Q8K4J2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf4Q8K4J2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.79■□□□□ 0.44
Ebf4Q8K4J2 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.79■□□□□ 0.44
Ebf4Q8K4J2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf4Q8K4J2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.79■□□□□ 0.44
Ebf4Q8K4J2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf4Q8K4J2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf4Q8K4J2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.79■□□□□ 0.44
Ebf4Q8K4J2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.79■□□□□ 0.44
Ebf4Q8K4J2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf4Q8K4J2 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.79■□□□□ 0.44
Ebf4Q8K4J2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf4Q8K4J2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf4Q8K4J2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Ebf4Q8K4J2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf4Q8K4J2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf4Q8K4J2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf4Q8K4J2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf4Q8K4J2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf4Q8K4J2 Gm27502-201ENSMUST00000183495 199 ntBASIC17.77■□□□□ 0.44
Ebf4Q8K4J2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf4Q8K4J2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ebf4Q8K4J2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ebf4Q8K4J2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ebf4Q8K4J2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ebf4Q8K4J2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms