Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nop53Q8BK35 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nop53Q8BK35 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.88■□□□□ 0.93
Nop53Q8BK35 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nop53Q8BK35 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Nop53Q8BK35 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nop53Q8BK35 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nop53Q8BK35 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nop53Q8BK35 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nop53Q8BK35 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nop53Q8BK35 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nop53Q8BK35 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nop53Q8BK35 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nop53Q8BK35 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.87■□□□□ 0.93
Nop53Q8BK35 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nop53Q8BK35 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nop53Q8BK35 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nop53Q8BK35 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.87■□□□□ 0.93
Nop53Q8BK35 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.87■□□□□ 0.93
Nop53Q8BK35 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.87■□□□□ 0.93
Nop53Q8BK35 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nop53Q8BK35 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.87■□□□□ 0.93
Nop53Q8BK35 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nop53Q8BK35 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nop53Q8BK35 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nop53Q8BK35 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nop53Q8BK35 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nop53Q8BK35 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nop53Q8BK35 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Nop53Q8BK35 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.86■□□□□ 0.93
Nop53Q8BK35 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Nop53Q8BK35 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nop53Q8BK35 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Gm13241-201ENSMUST00000094493 780 ntBASIC20.85■□□□□ 0.93
Nop53Q8BK35 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop53Q8BK35 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop53Q8BK35 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop53Q8BK35 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nop53Q8BK35 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nop53Q8BK35 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nop53Q8BK35 Gm12922-201ENSMUST00000120626 809 ntBASIC20.83■□□□□ 0.93
Nop53Q8BK35 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nop53Q8BK35 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Nop53Q8BK35 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nop53Q8BK35 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nop53Q8BK35 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Nop53Q8BK35 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nop53Q8BK35 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
Nop53Q8BK35 Gm9847-201ENSMUST00000052528 599 ntBASIC20.82■□□□□ 0.92
Nop53Q8BK35 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nop53Q8BK35 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nop53Q8BK35 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nop53Q8BK35 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.81■□□□□ 0.92
Nop53Q8BK35 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nop53Q8BK35 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nop53Q8BK35 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nop53Q8BK35 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nop53Q8BK35 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nop53Q8BK35 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nop53Q8BK35 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nop53Q8BK35 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nop53Q8BK35 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nop53Q8BK35 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nop53Q8BK35 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nop53Q8BK35 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nop53Q8BK35 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.8■□□□□ 0.92
Nop53Q8BK35 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nop53Q8BK35 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nop53Q8BK35 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nop53Q8BK35 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop53Q8BK35 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.79■□□□□ 0.92
Nop53Q8BK35 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop53Q8BK35 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.79■□□□□ 0.92
Nop53Q8BK35 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop53Q8BK35 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop53Q8BK35 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop53Q8BK35 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms