Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc6aQ78XR0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc6aQ78XR0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.41■□□□□ 0.7
Trappc6aQ78XR0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.4■□□□□ 0.7
Trappc6aQ78XR0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.4■□□□□ 0.7
Trappc6aQ78XR0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trappc6aQ78XR0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.4■□□□□ 0.7
Trappc6aQ78XR0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trappc6aQ78XR0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trappc6aQ78XR0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trappc6aQ78XR0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trappc6aQ78XR0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trappc6aQ78XR0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trappc6aQ78XR0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.39■□□□□ 0.69
Trappc6aQ78XR0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trappc6aQ78XR0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trappc6aQ78XR0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trappc6aQ78XR0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trappc6aQ78XR0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trappc6aQ78XR0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Trappc6aQ78XR0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trappc6aQ78XR0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Trappc6aQ78XR0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trappc6aQ78XR0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trappc6aQ78XR0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trappc6aQ78XR0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trappc6aQ78XR0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trappc6aQ78XR0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Nespas-201ENSMUST00000143738 1083 ntBASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trappc6aQ78XR0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trappc6aQ78XR0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trappc6aQ78XR0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trappc6aQ78XR0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trappc6aQ78XR0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trappc6aQ78XR0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trappc6aQ78XR0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.36■□□□□ 0.69
Trappc6aQ78XR0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trappc6aQ78XR0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.36■□□□□ 0.69
Trappc6aQ78XR0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trappc6aQ78XR0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trappc6aQ78XR0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trappc6aQ78XR0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.35■□□□□ 0.69
Trappc6aQ78XR0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trappc6aQ78XR0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trappc6aQ78XR0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Gm10653-202ENSMUST00000139570 835 ntBASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trappc6aQ78XR0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trappc6aQ78XR0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.33■□□□□ 0.69
Trappc6aQ78XR0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Trappc6aQ78XR0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trappc6aQ78XR0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.33■□□□□ 0.68
Trappc6aQ78XR0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Trappc6aQ78XR0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trappc6aQ78XR0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trappc6aQ78XR0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trappc6aQ78XR0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trappc6aQ78XR0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trappc6aQ78XR0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.32■□□□□ 0.68
Trappc6aQ78XR0 Gm6365-201ENSMUST00000054711 744 ntBASIC19.32■□□□□ 0.68
Trappc6aQ78XR0 Gm4968-201ENSMUST00000071458 858 ntBASIC19.32■□□□□ 0.68
Trappc6aQ78XR0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trappc6aQ78XR0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trappc6aQ78XR0 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.32■□□□□ 0.68
Trappc6aQ78XR0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trappc6aQ78XR0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trappc6aQ78XR0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.31■□□□□ 0.68
Trappc6aQ78XR0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trappc6aQ78XR0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trappc6aQ78XR0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.31■□□□□ 0.68
Trappc6aQ78XR0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms