Protein–RNA interactions for Protein: Q6RUU0

Ptx4, Pentraxin-4, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx4Q6RUU0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptx4Q6RUU0 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.89■□□□□ 0.61
Ptx4Q6RUU0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ptx4Q6RUU0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptx4Q6RUU0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptx4Q6RUU0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.88■□□□□ 0.61
Ptx4Q6RUU0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ptx4Q6RUU0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptx4Q6RUU0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ptx4Q6RUU0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ptx4Q6RUU0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ptx4Q6RUU0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptx4Q6RUU0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ptx4Q6RUU0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptx4Q6RUU0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptx4Q6RUU0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptx4Q6RUU0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptx4Q6RUU0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptx4Q6RUU0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.87■□□□□ 0.61
Ptx4Q6RUU0 AA386476-201ENSMUST00000098781 1665 ntBASIC18.87■□□□□ 0.61
Ptx4Q6RUU0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ptx4Q6RUU0 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.87■□□□□ 0.61
Ptx4Q6RUU0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptx4Q6RUU0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptx4Q6RUU0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptx4Q6RUU0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptx4Q6RUU0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ptx4Q6RUU0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptx4Q6RUU0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 Gm43137-201ENSMUST00000198052 594 ntBASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptx4Q6RUU0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.84■□□□□ 0.61
Ptx4Q6RUU0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Ptx4Q6RUU0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ptx4Q6RUU0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ptx4Q6RUU0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ptx4Q6RUU0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ptx4Q6RUU0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ptx4Q6RUU0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptx4Q6RUU0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ptx4Q6RUU0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ptx4Q6RUU0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ptx4Q6RUU0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ptx4Q6RUU0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Ptx4Q6RUU0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.83■□□□□ 0.6
Ptx4Q6RUU0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ptx4Q6RUU0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Ptx4Q6RUU0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptx4Q6RUU0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptx4Q6RUU0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ptx4Q6RUU0 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.83■□□□□ 0.6
Ptx4Q6RUU0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptx4Q6RUU0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptx4Q6RUU0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ptx4Q6RUU0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.82■□□□□ 0.6
Ptx4Q6RUU0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptx4Q6RUU0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptx4Q6RUU0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptx4Q6RUU0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptx4Q6RUU0 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.82■□□□□ 0.6
Ptx4Q6RUU0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptx4Q6RUU0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptx4Q6RUU0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptx4Q6RUU0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptx4Q6RUU0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.8■□□□□ 0.6
Ptx4Q6RUU0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptx4Q6RUU0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptx4Q6RUU0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptx4Q6RUU0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptx4Q6RUU0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ptx4Q6RUU0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptx4Q6RUU0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ptx4Q6RUU0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.8■□□□□ 0.6
Ptx4Q6RUU0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptx4Q6RUU0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.79■□□□□ 0.6
Ptx4Q6RUU0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms