Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VcanQ62059 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VcanQ62059 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.67■□□□□ 0.58
VcanQ62059 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
VcanQ62059 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VcanQ62059 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.66■□□□□ 0.58
VcanQ62059 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VcanQ62059 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VcanQ62059 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VcanQ62059 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VcanQ62059 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.66■□□□□ 0.58
VcanQ62059 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.66■□□□□ 0.58
VcanQ62059 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VcanQ62059 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VcanQ62059 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VcanQ62059 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.66■□□□□ 0.58
VcanQ62059 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.66■□□□□ 0.58
VcanQ62059 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VcanQ62059 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VcanQ62059 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VcanQ62059 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VcanQ62059 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VcanQ62059 Gm6420-201ENSMUST00000193885 723 ntBASIC18.65■□□□□ 0.58
VcanQ62059 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.65■□□□□ 0.58
VcanQ62059 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VcanQ62059 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VcanQ62059 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VcanQ62059 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
VcanQ62059 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VcanQ62059 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VcanQ62059 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VcanQ62059 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VcanQ62059 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.64■□□□□ 0.58
VcanQ62059 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.64■□□□□ 0.58
VcanQ62059 Gm9987-201ENSMUST00000069768 567 ntBASIC18.64■□□□□ 0.58
VcanQ62059 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.64■□□□□ 0.57
VcanQ62059 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VcanQ62059 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VcanQ62059 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
VcanQ62059 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VcanQ62059 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.64■□□□□ 0.57
VcanQ62059 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VcanQ62059 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VcanQ62059 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VcanQ62059 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VcanQ62059 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VcanQ62059 Gm10231-201ENSMUST00000181584 441 ntBASIC18.64■□□□□ 0.57
VcanQ62059 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VcanQ62059 Gm10175-202ENSMUST00000208752 441 ntBASIC18.64■□□□□ 0.57
VcanQ62059 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VcanQ62059 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VcanQ62059 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.63■□□□□ 0.57
VcanQ62059 Gm6211-202ENSMUST00000167849 925 ntBASIC18.63■□□□□ 0.57
VcanQ62059 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VcanQ62059 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VcanQ62059 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VcanQ62059 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VcanQ62059 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VcanQ62059 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VcanQ62059 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
VcanQ62059 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.62■□□□□ 0.57
VcanQ62059 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VcanQ62059 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VcanQ62059 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VcanQ62059 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VcanQ62059 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VcanQ62059 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VcanQ62059 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.62■□□□□ 0.57
VcanQ62059 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.62■□□□□ 0.57
VcanQ62059 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VcanQ62059 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.62■□□□□ 0.57
VcanQ62059 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
VcanQ62059 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VcanQ62059 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VcanQ62059 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VcanQ62059 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.61■□□□□ 0.57
VcanQ62059 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VcanQ62059 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.61■□□□□ 0.57
VcanQ62059 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VcanQ62059 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VcanQ62059 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VcanQ62059 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VcanQ62059 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VcanQ62059 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VcanQ62059 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.61■□□□□ 0.57
VcanQ62059 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.6■□□□□ 0.57
VcanQ62059 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VcanQ62059 Gm25925-201ENSMUST00000158314 306 ntBASIC18.6■□□□□ 0.57
VcanQ62059 Gm37055-201ENSMUST00000191866 133 ntBASIC18.6■□□□□ 0.57
VcanQ62059 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VcanQ62059 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VcanQ62059 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
VcanQ62059 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.6■□□□□ 0.57
VcanQ62059 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VcanQ62059 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VcanQ62059 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VcanQ62059 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.59■□□□□ 0.57
VcanQ62059 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VcanQ62059 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VcanQ62059 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms