Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 SMUG1P1-201ENST00000590640 811 ntBASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 AC011767.1-201ENST00000617410 1153 ntBASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD4Q5XG99 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 ABHD17AP1-201ENST00000358206 933 ntBASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 MIR663A-201ENST00000385250 93 ntBASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 NCF1B-203ENST00000435988 1254 ntBASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 AC010141.3-201ENST00000456659 717 ntBASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD4Q5XG99 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LYSMD4Q5XG99 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD4Q5XG99 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD4Q5XG99 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.78■■□□□ 1.08
LYSMD4Q5XG99 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.78■■□□□ 1.08
LYSMD4Q5XG99 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.78■■□□□ 1.08
LYSMD4Q5XG99 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD4Q5XG99 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.78■■□□□ 1.08
LYSMD4Q5XG99 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.78■■□□□ 1.08
LYSMD4Q5XG99 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
LYSMD4Q5XG99 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD4Q5XG99 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LYSMD4Q5XG99 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD4Q5XG99 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD4Q5XG99 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD4Q5XG99 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD4Q5XG99 AC079140.4-201ENST00000507448 529 ntBASIC21.77■■□□□ 1.08
LYSMD4Q5XG99 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.77■■□□□ 1.08
LYSMD4Q5XG99 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.77■■□□□ 1.08
LYSMD4Q5XG99 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD4Q5XG99 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
LYSMD4Q5XG99 ESRRAP2-201ENST00000418437 1549 ntBASIC21.76■■□□□ 1.07
LYSMD4Q5XG99 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD4Q5XG99 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD4Q5XG99 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD4Q5XG99 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.76■■□□□ 1.07
LYSMD4Q5XG99 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD4Q5XG99 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.76■■□□□ 1.07
LYSMD4Q5XG99 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.76■■□□□ 1.07
LYSMD4Q5XG99 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LYSMD4Q5XG99 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD4Q5XG99 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD4Q5XG99 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
LYSMD4Q5XG99 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 GPX1P1-201ENST00000388829 606 ntBASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.75■■□□□ 1.07
LYSMD4Q5XG99 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD4Q5XG99 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD4Q5XG99 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.73■■□□□ 1.07
LYSMD4Q5XG99 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD4Q5XG99 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms