Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
Shroom1Q5SX79 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom1Q5SX79 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom1Q5SX79 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shroom1Q5SX79 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Shroom1Q5SX79 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shroom1Q5SX79 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shroom1Q5SX79 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shroom1Q5SX79 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Shroom1Q5SX79 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom1Q5SX79 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.82■□□□□ 0.92
Shroom1Q5SX79 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom1Q5SX79 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom1Q5SX79 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom1Q5SX79 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom1Q5SX79 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shroom1Q5SX79 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shroom1Q5SX79 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shroom1Q5SX79 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shroom1Q5SX79 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.8■□□□□ 0.92
Shroom1Q5SX79 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.8■□□□□ 0.92
Shroom1Q5SX79 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shroom1Q5SX79 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shroom1Q5SX79 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Gm42778-201ENSMUST00000199644 553 ntBASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Shroom1Q5SX79 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom1Q5SX79 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shroom1Q5SX79 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shroom1Q5SX79 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shroom1Q5SX79 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shroom1Q5SX79 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.77■□□□□ 0.92
Shroom1Q5SX79 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Shroom1Q5SX79 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Shroom1Q5SX79 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shroom1Q5SX79 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.76■□□□□ 0.91
Shroom1Q5SX79 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.76■□□□□ 0.91
Shroom1Q5SX79 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shroom1Q5SX79 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shroom1Q5SX79 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.76■□□□□ 0.91
Shroom1Q5SX79 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shroom1Q5SX79 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shroom1Q5SX79 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.76■□□□□ 0.91
Shroom1Q5SX79 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom1Q5SX79 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom1Q5SX79 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.75■□□□□ 0.91
Shroom1Q5SX79 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Shroom1Q5SX79 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom1Q5SX79 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom1Q5SX79 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom1Q5SX79 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Shroom1Q5SX79 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Shroom1Q5SX79 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom1Q5SX79 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom1Q5SX79 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Shroom1Q5SX79 Gm27801-201ENSMUST00000184174 223 ntBASIC20.74■□□□□ 0.91
Shroom1Q5SX79 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom1Q5SX79 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.74■□□□□ 0.91
Shroom1Q5SX79 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom1Q5SX79 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms