Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brf2Q3UAW9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brf2Q3UAW9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brf2Q3UAW9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Brf2Q3UAW9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Brf2Q3UAW9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Brf2Q3UAW9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Brf2Q3UAW9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Brf2Q3UAW9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brf2Q3UAW9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brf2Q3UAW9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.39■□□□□ 0.53
Brf2Q3UAW9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Brf2Q3UAW9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brf2Q3UAW9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Brf2Q3UAW9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Brf2Q3UAW9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Brf2Q3UAW9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brf2Q3UAW9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Brf2Q3UAW9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Brf2Q3UAW9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brf2Q3UAW9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brf2Q3UAW9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brf2Q3UAW9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brf2Q3UAW9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Brf2Q3UAW9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Brf2Q3UAW9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Brf2Q3UAW9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Brf2Q3UAW9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Brf2Q3UAW9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Brf2Q3UAW9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Brf2Q3UAW9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Brf2Q3UAW9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.36■□□□□ 0.53
Brf2Q3UAW9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Brf2Q3UAW9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Brf2Q3UAW9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Brf2Q3UAW9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Brf2Q3UAW9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Brf2Q3UAW9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brf2Q3UAW9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brf2Q3UAW9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.35■□□□□ 0.53
Brf2Q3UAW9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brf2Q3UAW9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brf2Q3UAW9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brf2Q3UAW9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.35■□□□□ 0.53
Brf2Q3UAW9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Brf2Q3UAW9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Brf2Q3UAW9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Brf2Q3UAW9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Brf2Q3UAW9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brf2Q3UAW9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brf2Q3UAW9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.34■□□□□ 0.53
Brf2Q3UAW9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brf2Q3UAW9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Brf2Q3UAW9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.34■□□□□ 0.53
Brf2Q3UAW9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Brf2Q3UAW9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Brf2Q3UAW9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Brf2Q3UAW9 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.34■□□□□ 0.53
Brf2Q3UAW9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Brf2Q3UAW9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Brf2Q3UAW9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.53
Brf2Q3UAW9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Brf2Q3UAW9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Brf2Q3UAW9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brf2Q3UAW9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brf2Q3UAW9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Brf2Q3UAW9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Brf2Q3UAW9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Brf2Q3UAW9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brf2Q3UAW9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brf2Q3UAW9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brf2Q3UAW9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brf2Q3UAW9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brf2Q3UAW9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brf2Q3UAW9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Brf2Q3UAW9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brf2Q3UAW9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brf2Q3UAW9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.31■□□□□ 0.52
Brf2Q3UAW9 Golph3-202ENSMUST00000226517 2359 ntBASIC18.31■□□□□ 0.52
Brf2Q3UAW9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brf2Q3UAW9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Brf2Q3UAW9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brf2Q3UAW9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brf2Q3UAW9 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.31■□□□□ 0.52
Brf2Q3UAW9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brf2Q3UAW9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Brf2Q3UAW9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms