Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPNS1P04632 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.83■■□□□ 1.09
CAPNS1P04632 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CAPNS1P04632 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPNS1P04632 AC027612.3-201ENST00000413684 1047 ntBASIC21.83■■□□□ 1.09
CAPNS1P04632 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.83■■□□□ 1.09
CAPNS1P04632 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CAPNS1P04632 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CAPNS1P04632 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.83■■□□□ 1.09
CAPNS1P04632 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPNS1P04632 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CAPNS1P04632 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CAPNS1P04632 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CAPNS1P04632 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPNS1P04632 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPNS1P04632 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CAPNS1P04632 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPNS1P04632 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPNS1P04632 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPNS1P04632 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPNS1P04632 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.82■■□□□ 1.08
CAPNS1P04632 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.82■■□□□ 1.08
CAPNS1P04632 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
CAPNS1P04632 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPNS1P04632 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPNS1P04632 AC127496.7-201ENST00000625110 1798 ntBASIC21.82■■□□□ 1.08
CAPNS1P04632 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPNS1P04632 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPNS1P04632 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CAPNS1P04632 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.81■■□□□ 1.08
CAPNS1P04632 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPNS1P04632 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPNS1P04632 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPNS1P04632 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.81■■□□□ 1.08
CAPNS1P04632 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPNS1P04632 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPNS1P04632 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPNS1P04632 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPNS1P04632 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPNS1P04632 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPNS1P04632 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPNS1P04632 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPNS1P04632 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPNS1P04632 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.8■■□□□ 1.08
CAPNS1P04632 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPNS1P04632 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPNS1P04632 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPNS1P04632 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPNS1P04632 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPNS1P04632 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.79■■□□□ 1.08
CAPNS1P04632 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPNS1P04632 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPNS1P04632 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPNS1P04632 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.79■■□□□ 1.08
CAPNS1P04632 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CAPNS1P04632 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.79■■□□□ 1.08
CAPNS1P04632 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.79■■□□□ 1.08
CAPNS1P04632 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CAPNS1P04632 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPNS1P04632 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.79■■□□□ 1.08
CAPNS1P04632 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPNS1P04632 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPNS1P04632 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.78■■□□□ 1.08
CAPNS1P04632 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CAPNS1P04632 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.78■■□□□ 1.08
CAPNS1P04632 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.78■■□□□ 1.08
CAPNS1P04632 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.78■■□□□ 1.08
CAPNS1P04632 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.78■■□□□ 1.08
CAPNS1P04632 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CAPNS1P04632 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CAPNS1P04632 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPNS1P04632 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPNS1P04632 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPNS1P04632 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CAPNS1P04632 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CAPNS1P04632 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPNS1P04632 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CAPNS1P04632 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
CAPNS1P04632 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.77■■□□□ 1.08
CAPNS1P04632 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.77■■□□□ 1.08
CAPNS1P04632 RAP2CP1-201ENST00000605103 478 ntBASIC21.77■■□□□ 1.08
CAPNS1P04632 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPNS1P04632 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPNS1P04632 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPNS1P04632 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CAPNS1P04632 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CAPNS1P04632 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPNS1P04632 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CAPNS1P04632 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPNS1P04632 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPNS1P04632 NTF6G-201ENST00000591094 616 ntBASIC21.76■■□□□ 1.07
CAPNS1P04632 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CAPNS1P04632 HLA-L-211ENST00000482052 1765 ntBASIC21.76■■□□□ 1.07
CAPNS1P04632 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPNS1P04632 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPNS1P04632 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPNS1P04632 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPNS1P04632 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPNS1P04632 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.75■■□□□ 1.07
CAPNS1P04632 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms