Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CfdP03953 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CfdP03953 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CfdP03953 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CfdP03953 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.33■□□□□ 0.2
CfdP03953 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CfdP03953 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CfdP03953 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CfdP03953 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CfdP03953 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CfdP03953 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CfdP03953 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.33■□□□□ 0.2
CfdP03953 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CfdP03953 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.32■□□□□ 0.2
CfdP03953 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CfdP03953 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CfdP03953 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CfdP03953 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CfdP03953 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CfdP03953 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CfdP03953 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CfdP03953 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CfdP03953 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.31■□□□□ 0.2
CfdP03953 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CfdP03953 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CfdP03953 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CfdP03953 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CfdP03953 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CfdP03953 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CfdP03953 Grk6-206ENSMUST00000224995 2971 ntBASIC16.31■□□□□ 0.2
CfdP03953 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.31■□□□□ 0.2
CfdP03953 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
CfdP03953 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.31■□□□□ 0.2
CfdP03953 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CfdP03953 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CfdP03953 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CfdP03953 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.3■□□□□ 0.2
CfdP03953 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CfdP03953 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CfdP03953 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CfdP03953 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.3■□□□□ 0.2
CfdP03953 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CfdP03953 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.3■□□□□ 0.2
CfdP03953 Gm7143-201ENSMUST00000222811 859 ntBASIC16.3■□□□□ 0.2
CfdP03953 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.3■□□□□ 0.2
CfdP03953 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CfdP03953 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CfdP03953 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
CfdP03953 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CfdP03953 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CfdP03953 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.29■□□□□ 0.2
CfdP03953 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
CfdP03953 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.29■□□□□ 0.2
CfdP03953 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CfdP03953 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.28■□□□□ 0.2
CfdP03953 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.28■□□□□ 0.2
CfdP03953 Gm11175-201ENSMUST00000116172 543 ntBASIC16.28■□□□□ 0.2
CfdP03953 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.28■□□□□ 0.2
CfdP03953 Mir6236-201ENSMUST00000184437 123 ntBASIC16.28■□□□□ 0.2
CfdP03953 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CfdP03953 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CfdP03953 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CfdP03953 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms