Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh20Q9Z0M3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh20Q9Z0M3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh20Q9Z0M3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh20Q9Z0M3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh20Q9Z0M3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh20Q9Z0M3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Cdh20Q9Z0M3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh20Q9Z0M3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.14■□□□□ 0.49
Cdh20Q9Z0M3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh20Q9Z0M3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdh20Q9Z0M3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh20Q9Z0M3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh20Q9Z0M3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh20Q9Z0M3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Cdh20Q9Z0M3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh20Q9Z0M3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh20Q9Z0M3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh20Q9Z0M3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh20Q9Z0M3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh20Q9Z0M3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh20Q9Z0M3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Cdh20Q9Z0M3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh20Q9Z0M3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh20Q9Z0M3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh20Q9Z0M3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdh20Q9Z0M3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdh20Q9Z0M3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh20Q9Z0M3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh20Q9Z0M3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh20Q9Z0M3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh20Q9Z0M3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Gm13241-201ENSMUST00000094493 780 ntBASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh20Q9Z0M3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh20Q9Z0M3 Golph3-202ENSMUST00000226517 2359 ntBASIC18.09■□□□□ 0.49
Cdh20Q9Z0M3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh20Q9Z0M3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh20Q9Z0M3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh20Q9Z0M3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh20Q9Z0M3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh20Q9Z0M3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh20Q9Z0M3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh20Q9Z0M3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdh20Q9Z0M3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cdh20Q9Z0M3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdh20Q9Z0M3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdh20Q9Z0M3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh20Q9Z0M3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh20Q9Z0M3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Cdh20Q9Z0M3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh20Q9Z0M3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh20Q9Z0M3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh20Q9Z0M3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh20Q9Z0M3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh20Q9Z0M3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh20Q9Z0M3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh20Q9Z0M3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cdh20Q9Z0M3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh20Q9Z0M3 AA386476-201ENSMUST00000098781 1665 ntBASIC18.07■□□□□ 0.48
Cdh20Q9Z0M3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms