Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 IGHV3-19-201ENST00000521488 291 ntBASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 AC027612.3-201ENST00000413684 1047 ntBASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA3Q9Y5H0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 MIR572-201ENST00000384983 95 ntBASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 AC123595.1-201ENST00000440769 1046 ntBASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 AL499627.2-201ENST00000606283 725 ntBASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.3■■□□□ 1
PCDHGA3Q9Y5H0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA3Q9Y5H0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 AC133637.1-201ENST00000624115 1537 ntBASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGA3Q9Y5H0 FP325331.1-202ENST00000623531 1380 ntBASIC21.27■■□□□ 1
PCDHGA3Q9Y5H0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA3Q9Y5H0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA3Q9Y5H0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
PCDHGA3Q9Y5H0 AL354811.1-201ENST00000610286 706 ntBASIC21.27■■□□□ 1
PCDHGA3Q9Y5H0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
PCDHGA3Q9Y5H0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.27■■□□□ 1
PCDHGA3Q9Y5H0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA3Q9Y5H0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.27■□□□□ 0.99
PCDHGA3Q9Y5H0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
PCDHGA3Q9Y5H0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 KRT18P5-201ENST00000436075 1291 ntBASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDHGA3Q9Y5H0 AL031602.1-201ENST00000633169 911 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms