Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 AL136162.1-201ENST00000607711 1078 ntBASIC19.24■□□□□ 0.67
CDH20Q9HBT6 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.24■□□□□ 0.67
CDH20Q9HBT6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH20Q9HBT6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH20Q9HBT6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH20Q9HBT6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDH20Q9HBT6 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH20Q9HBT6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH20Q9HBT6 AL499627.2-201ENST00000606283 725 ntBASIC19.23■□□□□ 0.67
CDH20Q9HBT6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH20Q9HBT6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH20Q9HBT6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH20Q9HBT6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH20Q9HBT6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 AC011298.3-201ENST00000615796 283 ntBASIC19.22■□□□□ 0.67
CDH20Q9HBT6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH20Q9HBT6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH20Q9HBT6 AC133637.1-201ENST00000624115 1537 ntBASIC19.21■□□□□ 0.67
CDH20Q9HBT6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH20Q9HBT6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH20Q9HBT6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH20Q9HBT6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH20Q9HBT6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDH20Q9HBT6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH20Q9HBT6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH20Q9HBT6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 PBX2P1-201ENST00000493219 1291 ntBASIC19.2■□□□□ 0.66
CDH20Q9HBT6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 AC135279.3-201ENST00000610945 1311 ntBASIC19.2■□□□□ 0.66
CDH20Q9HBT6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CDH20Q9HBT6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH20Q9HBT6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH20Q9HBT6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH20Q9HBT6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CDH20Q9HBT6 PKD1P6-201ENST00000343738 4769 ntBASIC19.19■□□□□ 0.66
CDH20Q9HBT6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDH20Q9HBT6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH20Q9HBT6 AC024257.2-201ENST00000549699 147 ntBASIC19.19■□□□□ 0.66
CDH20Q9HBT6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH20Q9HBT6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH20Q9HBT6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH20Q9HBT6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH20Q9HBT6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH20Q9HBT6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 AC004687.1-201ENST00000579003 1625 ntBASIC19.18■□□□□ 0.66
CDH20Q9HBT6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 AL139246.5-201ENST00000606645 996 ntBASIC19.18■□□□□ 0.66
CDH20Q9HBT6 AC110285.6-201ENST00000617652 491 ntBASIC19.18■□□□□ 0.66
CDH20Q9HBT6 AC136469.2-201ENST00000623944 1028 ntBASIC19.18■□□□□ 0.66
CDH20Q9HBT6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH20Q9HBT6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms