Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q9CR55 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.12■□□□□ 0.49
Q9CR55 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.12■□□□□ 0.49
Q9CR55 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Q9CR55 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q9CR55 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q9CR55 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q9CR55 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.12■□□□□ 0.49
Q9CR55 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.11■□□□□ 0.49
Q9CR55 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.11■□□□□ 0.49
Q9CR55 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Q9CR55 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.11■□□□□ 0.49
Q9CR55 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9CR55 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Q9CR55 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Q9CR55 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.1■□□□□ 0.49
Q9CR55 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9CR55 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9CR55 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.1■□□□□ 0.49
Q9CR55 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Q9CR55 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Q9CR55 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Q9CR55 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.1■□□□□ 0.49
Q9CR55 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9CR55 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Q9CR55 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9CR55 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9CR55 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9CR55 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9CR55 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Q9CR55 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Q9CR55 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9CR55 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9CR55 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9CR55 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9CR55 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9CR55 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9CR55 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9CR55 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Q9CR55 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.09■□□□□ 0.49
Q9CR55 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9CR55 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Q9CR55 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.08■□□□□ 0.49
Q9CR55 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Q9CR55 Gm14523-201ENSMUST00000117260 558 ntBASIC18.08■□□□□ 0.48
Q9CR55 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Q9CR55 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Q9CR55 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Q9CR55 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.08■□□□□ 0.48
Q9CR55 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Q9CR55 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Q9CR55 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Q9CR55 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q9CR55 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q9CR55 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.07■□□□□ 0.48
Q9CR55 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q9CR55 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q9CR55 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Q9CR55 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Q9CR55 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.07■□□□□ 0.48
Q9CR55 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Q9CR55 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.07■□□□□ 0.48
Q9CR55 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.07■□□□□ 0.48
Q9CR55 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q9CR55 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q9CR55 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q9CR55 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Q9CR55 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q9CR55 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q9CR55 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q9CR55 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Q9CR55 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Q9CR55 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.06■□□□□ 0.48
Q9CR55 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Q9CR55 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q9CR55 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q9CR55 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q9CR55 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Q9CR55 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q9CR55 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q9CR55 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q9CR55 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q9CR55 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Q9CR55 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q9CR55 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q9CR55 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.05■□□□□ 0.48
Q9CR55 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms