Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afjQ8R1M2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afjQ8R1M2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afjQ8R1M2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afjQ8R1M2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afjQ8R1M2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afjQ8R1M2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afjQ8R1M2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2afjQ8R1M2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afjQ8R1M2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afjQ8R1M2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
H2afjQ8R1M2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afjQ8R1M2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
H2afjQ8R1M2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2afjQ8R1M2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
H2afjQ8R1M2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afjQ8R1M2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
H2afjQ8R1M2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afjQ8R1M2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
H2afjQ8R1M2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afjQ8R1M2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.14■□□□□ 0.49
H2afjQ8R1M2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afjQ8R1M2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afjQ8R1M2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afjQ8R1M2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afjQ8R1M2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.14■□□□□ 0.49
H2afjQ8R1M2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
H2afjQ8R1M2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
H2afjQ8R1M2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
H2afjQ8R1M2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afjQ8R1M2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afjQ8R1M2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afjQ8R1M2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afjQ8R1M2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
H2afjQ8R1M2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afjQ8R1M2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afjQ8R1M2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afjQ8R1M2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afjQ8R1M2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afjQ8R1M2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afjQ8R1M2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afjQ8R1M2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afjQ8R1M2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afjQ8R1M2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afjQ8R1M2 Gm9870-201ENSMUST00000063874 645 ntBASIC18.11■□□□□ 0.49
H2afjQ8R1M2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms