Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.24■■□□□ 1.31
SCUBE3Q8IX30 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.24■■□□□ 1.31
SCUBE3Q8IX30 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SCUBE3Q8IX30 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 MIR4767-201ENST00000582827 78 ntBASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SCUBE3Q8IX30 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 AC068473.5-201ENST00000616428 2072 ntBASIC23.21■■□□□ 1.31
SCUBE3Q8IX30 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.2■■□□□ 1.3
SCUBE3Q8IX30 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.2■■□□□ 1.3
SCUBE3Q8IX30 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SCUBE3Q8IX30 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCUBE3Q8IX30 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCUBE3Q8IX30 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.2■■□□□ 1.3
SCUBE3Q8IX30 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCUBE3Q8IX30 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCUBE3Q8IX30 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.19■■□□□ 1.3
SCUBE3Q8IX30 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.19■■□□□ 1.3
SCUBE3Q8IX30 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCUBE3Q8IX30 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.19■■□□□ 1.3
SCUBE3Q8IX30 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCUBE3Q8IX30 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCUBE3Q8IX30 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCUBE3Q8IX30 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCUBE3Q8IX30 AC133561.1-201ENST00000568600 2415 ntBASIC23.18■■□□□ 1.3
SCUBE3Q8IX30 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCUBE3Q8IX30 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SCUBE3Q8IX30 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.18■■□□□ 1.3
SCUBE3Q8IX30 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCUBE3Q8IX30 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCUBE3Q8IX30 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCUBE3Q8IX30 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCUBE3Q8IX30 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SCUBE3Q8IX30 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCUBE3Q8IX30 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SCUBE3Q8IX30 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SCUBE3Q8IX30 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.16■■□□□ 1.3
SCUBE3Q8IX30 AC010525.1-201ENST00000585559 441 ntBASIC23.16■■□□□ 1.3
SCUBE3Q8IX30 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.16■■□□□ 1.3
SCUBE3Q8IX30 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.15■■□□□ 1.3
SCUBE3Q8IX30 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.15■■□□□ 1.3
SCUBE3Q8IX30 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
SCUBE3Q8IX30 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.15■■□□□ 1.3
SCUBE3Q8IX30 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SCUBE3Q8IX30 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SCUBE3Q8IX30 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCUBE3Q8IX30 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SCUBE3Q8IX30 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms