Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fam228aQ8CDW1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fam228aQ8CDW1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
Fam228aQ8CDW1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fam228aQ8CDW1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fam228aQ8CDW1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Fam228aQ8CDW1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fam228aQ8CDW1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Fam228aQ8CDW1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Fam228aQ8CDW1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.56■□□□□ 0.88
Fam228aQ8CDW1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fam228aQ8CDW1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.56■□□□□ 0.88
Fam228aQ8CDW1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.56■□□□□ 0.88
Fam228aQ8CDW1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Fam228aQ8CDW1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fam228aQ8CDW1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fam228aQ8CDW1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam228aQ8CDW1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam228aQ8CDW1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Fam228aQ8CDW1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam228aQ8CDW1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam228aQ8CDW1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam228aQ8CDW1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Fam228aQ8CDW1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam228aQ8CDW1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam228aQ8CDW1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam228aQ8CDW1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Fam228aQ8CDW1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam228aQ8CDW1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.54■□□□□ 0.88
Fam228aQ8CDW1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam228aQ8CDW1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam228aQ8CDW1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Fam228aQ8CDW1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam228aQ8CDW1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam228aQ8CDW1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam228aQ8CDW1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fam228aQ8CDW1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam228aQ8CDW1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam228aQ8CDW1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Fam228aQ8CDW1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.52■□□□□ 0.88
Fam228aQ8CDW1 Gm40881-201ENSMUST00000223397 166 ntBASIC20.52■□□□□ 0.88
Fam228aQ8CDW1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam228aQ8CDW1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam228aQ8CDW1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fam228aQ8CDW1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fam228aQ8CDW1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Fam228aQ8CDW1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam228aQ8CDW1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.51■□□□□ 0.87
Fam228aQ8CDW1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam228aQ8CDW1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam228aQ8CDW1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam228aQ8CDW1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Fam228aQ8CDW1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Golph3-205ENSMUST00000228671 2842 ntBASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Fam228aQ8CDW1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam228aQ8CDW1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam228aQ8CDW1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam228aQ8CDW1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Fam228aQ8CDW1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.49■□□□□ 0.87
Fam228aQ8CDW1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam228aQ8CDW1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms