Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpa1Q8BLA8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpa1Q8BLA8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpa1Q8BLA8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.55■□□□□ 0.88
Trpa1Q8BLA8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpa1Q8BLA8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpa1Q8BLA8 Gm6139-201ENSMUST00000079261 882 ntBASIC20.55■□□□□ 0.88
Trpa1Q8BLA8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpa1Q8BLA8 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.55■□□□□ 0.88
Trpa1Q8BLA8 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.54■□□□□ 0.88
Trpa1Q8BLA8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpa1Q8BLA8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpa1Q8BLA8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Trpa1Q8BLA8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trpa1Q8BLA8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpa1Q8BLA8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trpa1Q8BLA8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.54■□□□□ 0.88
Trpa1Q8BLA8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trpa1Q8BLA8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trpa1Q8BLA8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trpa1Q8BLA8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trpa1Q8BLA8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trpa1Q8BLA8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Trpa1Q8BLA8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.53■□□□□ 0.88
Trpa1Q8BLA8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Trpa1Q8BLA8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trpa1Q8BLA8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trpa1Q8BLA8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trpa1Q8BLA8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trpa1Q8BLA8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpa1Q8BLA8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpa1Q8BLA8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpa1Q8BLA8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpa1Q8BLA8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Trpa1Q8BLA8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpa1Q8BLA8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpa1Q8BLA8 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.52■□□□□ 0.88
Trpa1Q8BLA8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpa1Q8BLA8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpa1Q8BLA8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Trpa1Q8BLA8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trpa1Q8BLA8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trpa1Q8BLA8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trpa1Q8BLA8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trpa1Q8BLA8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trpa1Q8BLA8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpa1Q8BLA8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trpa1Q8BLA8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpa1Q8BLA8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpa1Q8BLA8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpa1Q8BLA8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.51■□□□□ 0.87
Trpa1Q8BLA8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trpa1Q8BLA8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpa1Q8BLA8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trpa1Q8BLA8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpa1Q8BLA8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Gm8493-201ENSMUST00000196881 489 ntBASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Spcs1-204ENSMUST00000226782 949 ntBASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpa1Q8BLA8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trpa1Q8BLA8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.49■□□□□ 0.87
Trpa1Q8BLA8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trpa1Q8BLA8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.49■□□□□ 0.87
Trpa1Q8BLA8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trpa1Q8BLA8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trpa1Q8BLA8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trpa1Q8BLA8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trpa1Q8BLA8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trpa1Q8BLA8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpa1Q8BLA8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trpa1Q8BLA8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpa1Q8BLA8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpa1Q8BLA8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpa1Q8BLA8 Gm43017-201ENSMUST00000198296 752 ntBASIC20.48■□□□□ 0.87
Trpa1Q8BLA8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.48■□□□□ 0.87
Trpa1Q8BLA8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trpa1Q8BLA8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trpa1Q8BLA8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trpa1Q8BLA8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpa1Q8BLA8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpa1Q8BLA8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpa1Q8BLA8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpa1Q8BLA8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.47■□□□□ 0.87
Trpa1Q8BLA8 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.47■□□□□ 0.87
Trpa1Q8BLA8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.47■□□□□ 0.87
Trpa1Q8BLA8 Gm43173-201ENSMUST00000202246 593 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms