Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom1Q5SX79 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom1Q5SX79 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.91■□□□□ 0.94
Shroom1Q5SX79 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom1Q5SX79 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom1Q5SX79 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom1Q5SX79 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom1Q5SX79 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom1Q5SX79 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom1Q5SX79 Gm29257-201ENSMUST00000186115 639 ntBASIC20.9■□□□□ 0.94
Shroom1Q5SX79 Gm10033-202ENSMUST00000211874 928 ntBASIC20.9■□□□□ 0.94
Shroom1Q5SX79 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Shroom1Q5SX79 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom1Q5SX79 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Shroom1Q5SX79 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom1Q5SX79 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom1Q5SX79 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom1Q5SX79 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Shroom1Q5SX79 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
Shroom1Q5SX79 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Shroom1Q5SX79 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.89■□□□□ 0.93
Shroom1Q5SX79 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.89■□□□□ 0.93
Shroom1Q5SX79 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom1Q5SX79 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom1Q5SX79 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom1Q5SX79 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.89■□□□□ 0.93
Shroom1Q5SX79 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Shroom1Q5SX79 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom1Q5SX79 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom1Q5SX79 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Gm18671-201ENSMUST00000214826 683 ntBASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom1Q5SX79 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom1Q5SX79 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom1Q5SX79 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom1Q5SX79 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom1Q5SX79 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Shroom1Q5SX79 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.87■□□□□ 0.93
Shroom1Q5SX79 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom1Q5SX79 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom1Q5SX79 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
Shroom1Q5SX79 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom1Q5SX79 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom1Q5SX79 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Shroom1Q5SX79 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom1Q5SX79 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shroom1Q5SX79 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Gm37179-201ENSMUST00000194862 823 ntBASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shroom1Q5SX79 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom1Q5SX79 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom1Q5SX79 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom1Q5SX79 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.85■□□□□ 0.93
Shroom1Q5SX79 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom1Q5SX79 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom1Q5SX79 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.85■□□□□ 0.93
Shroom1Q5SX79 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom1Q5SX79 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom1Q5SX79 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.85■□□□□ 0.93
Shroom1Q5SX79 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom1Q5SX79 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom1Q5SX79 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Shroom1Q5SX79 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Shroom1Q5SX79 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom1Q5SX79 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom1Q5SX79 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.84■□□□□ 0.93
Shroom1Q5SX79 AV356131-201ENSMUST00000206201 750 ntBASIC20.84■□□□□ 0.93
Shroom1Q5SX79 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Shroom1Q5SX79 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom1Q5SX79 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Shroom1Q5SX79 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom1Q5SX79 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom1Q5SX79 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom1Q5SX79 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.83■□□□□ 0.93
Shroom1Q5SX79 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Shroom1Q5SX79 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms