Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21■□□□□ 0.95
BC051142Q3V0M8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21■□□□□ 0.95
BC051142Q3V0M8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BC051142Q3V0M8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BC051142Q3V0M8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BC051142Q3V0M8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
BC051142Q3V0M8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
BC051142Q3V0M8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BC051142Q3V0M8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BC051142Q3V0M8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BC051142Q3V0M8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BC051142Q3V0M8 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.98■□□□□ 0.95
BC051142Q3V0M8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BC051142Q3V0M8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BC051142Q3V0M8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
BC051142Q3V0M8 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.98■□□□□ 0.95
BC051142Q3V0M8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
BC051142Q3V0M8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
BC051142Q3V0M8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.97■□□□□ 0.95
BC051142Q3V0M8 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.97■□□□□ 0.95
BC051142Q3V0M8 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.97■□□□□ 0.95
BC051142Q3V0M8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BC051142Q3V0M8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
BC051142Q3V0M8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.96■□□□□ 0.95
BC051142Q3V0M8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BC051142Q3V0M8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.96■□□□□ 0.95
BC051142Q3V0M8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BC051142Q3V0M8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
BC051142Q3V0M8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
BC051142Q3V0M8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BC051142Q3V0M8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BC051142Q3V0M8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
BC051142Q3V0M8 Gm9847-201ENSMUST00000052528 599 ntBASIC20.95■□□□□ 0.94
BC051142Q3V0M8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
BC051142Q3V0M8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BC051142Q3V0M8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
BC051142Q3V0M8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BC051142Q3V0M8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BC051142Q3V0M8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BC051142Q3V0M8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
BC051142Q3V0M8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BC051142Q3V0M8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.93■□□□□ 0.94
BC051142Q3V0M8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.93■□□□□ 0.94
BC051142Q3V0M8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BC051142Q3V0M8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BC051142Q3V0M8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BC051142Q3V0M8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BC051142Q3V0M8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BC051142Q3V0M8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BC051142Q3V0M8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
BC051142Q3V0M8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BC051142Q3V0M8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
BC051142Q3V0M8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BC051142Q3V0M8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.92■□□□□ 0.94
BC051142Q3V0M8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BC051142Q3V0M8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BC051142Q3V0M8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BC051142Q3V0M8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.91■□□□□ 0.94
BC051142Q3V0M8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.91■□□□□ 0.94
BC051142Q3V0M8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BC051142Q3V0M8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
BC051142Q3V0M8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BC051142Q3V0M8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BC051142Q3V0M8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BC051142Q3V0M8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BC051142Q3V0M8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BC051142Q3V0M8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BC051142Q3V0M8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
BC051142Q3V0M8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.9■□□□□ 0.94
BC051142Q3V0M8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
BC051142Q3V0M8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BC051142Q3V0M8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.89■□□□□ 0.94
BC051142Q3V0M8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BC051142Q3V0M8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BC051142Q3V0M8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.89■□□□□ 0.93
BC051142Q3V0M8 Gm21956-201ENSMUST00000179946 522 ntBASIC20.89■□□□□ 0.93
BC051142Q3V0M8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BC051142Q3V0M8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BC051142Q3V0M8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BC051142Q3V0M8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BC051142Q3V0M8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BC051142Q3V0M8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BC051142Q3V0M8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
BC051142Q3V0M8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BC051142Q3V0M8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BC051142Q3V0M8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
BC051142Q3V0M8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
BC051142Q3V0M8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.88■□□□□ 0.93
BC051142Q3V0M8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BC051142Q3V0M8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BC051142Q3V0M8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BC051142Q3V0M8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
BC051142Q3V0M8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.88■□□□□ 0.93
BC051142Q3V0M8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BC051142Q3V0M8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
BC051142Q3V0M8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BC051142Q3V0M8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BC051142Q3V0M8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BC051142Q3V0M8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
BC051142Q3V0M8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms