Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ABCA4P78363 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ABCA4P78363 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ABCA4P78363 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.08■□□□□ 0.65
ABCA4P78363 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.08■□□□□ 0.65
ABCA4P78363 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ABCA4P78363 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ABCA4P78363 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA4P78363 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCA4P78363 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ABCA4P78363 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.08■□□□□ 0.64
ABCA4P78363 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ABCA4P78363 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA4P78363 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.07■□□□□ 0.64
ABCA4P78363 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.07■□□□□ 0.64
ABCA4P78363 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA4P78363 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA4P78363 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.07■□□□□ 0.64
ABCA4P78363 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.07■□□□□ 0.64
ABCA4P78363 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.07■□□□□ 0.64
ABCA4P78363 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.07■□□□□ 0.64
ABCA4P78363 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA4P78363 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA4P78363 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.07■□□□□ 0.64
ABCA4P78363 AC137761.2-201ENST00000561729 223 ntBASIC19.07■□□□□ 0.64
ABCA4P78363 AC145350.3-201ENST00000569033 163 ntBASIC19.07■□□□□ 0.64
ABCA4P78363 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.07■□□□□ 0.64
ABCA4P78363 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA4P78363 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA4P78363 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA4P78363 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ABCA4P78363 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA4P78363 AC004854.2-201ENST00000608450 1441 ntBASIC19.06■□□□□ 0.64
ABCA4P78363 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA4P78363 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA4P78363 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA4P78363 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA4P78363 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ABCA4P78363 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ABCA4P78363 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA4P78363 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA4P78363 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA4P78363 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCA4P78363 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA4P78363 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA4P78363 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA4P78363 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA4P78363 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ABCA4P78363 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCA4P78363 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA4P78363 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA4P78363 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA4P78363 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA4P78363 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.04■□□□□ 0.64
ABCA4P78363 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.04■□□□□ 0.64
ABCA4P78363 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA4P78363 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.04■□□□□ 0.64
ABCA4P78363 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCA4P78363 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA4P78363 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.04■□□□□ 0.64
ABCA4P78363 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA4P78363 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.04■□□□□ 0.64
ABCA4P78363 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ABCA4P78363 AC006015.1-201ENST00000429970 570 ntBASIC19.04■□□□□ 0.64
ABCA4P78363 AC026185.1-201ENST00000445748 174 ntBASIC19.04■□□□□ 0.64
ABCA4P78363 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.04■□□□□ 0.64
ABCA4P78363 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.04■□□□□ 0.64
ABCA4P78363 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.04■□□□□ 0.64
ABCA4P78363 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA4P78363 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA4P78363 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA4P78363 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.03■□□□□ 0.64
ABCA4P78363 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA4P78363 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ABCA4P78363 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA4P78363 DUX4L4-201ENST00000566884 1269 ntBASIC19.03■□□□□ 0.64
ABCA4P78363 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.03■□□□□ 0.64
ABCA4P78363 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.02■□□□□ 0.64
ABCA4P78363 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA4P78363 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA4P78363 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
ABCA4P78363 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA4P78363 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ABCA4P78363 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA4P78363 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA4P78363 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.02■□□□□ 0.63
ABCA4P78363 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.02■□□□□ 0.63
ABCA4P78363 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.02■□□□□ 0.63
ABCA4P78363 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.02■□□□□ 0.63
ABCA4P78363 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.02■□□□□ 0.63
ABCA4P78363 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.02■□□□□ 0.63
ABCA4P78363 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
ABCA4P78363 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA4P78363 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ABCA4P78363 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA4P78363 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA4P78363 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA4P78363 KRT19P1-201ENST00000405746 1186 ntBASIC19.01■□□□□ 0.63
ABCA4P78363 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.01■□□□□ 0.63
ABCA4P78363 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms