Protein–RNA interactions for Protein: P70339

Frat1, Proto-oncogene FRAT1, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frat1P70339 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Frat1P70339 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Frat1P70339 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Frat1P70339 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Frat1P70339 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Frat1P70339 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Frat1P70339 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.32■■□□□ 1
Frat1P70339 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Frat1P70339 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.32■■□□□ 1
Frat1P70339 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.32■■□□□ 1
Frat1P70339 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Frat1P70339 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Frat1P70339 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.31■■□□□ 1
Frat1P70339 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.31■■□□□ 1
Frat1P70339 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.31■■□□□ 1
Frat1P70339 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Frat1P70339 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.31■■□□□ 1
Frat1P70339 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Frat1P70339 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Frat1P70339 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Frat1P70339 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Frat1P70339 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Frat1P70339 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.3■■□□□ 1
Frat1P70339 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.3■■□□□ 1
Frat1P70339 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.3■■□□□ 1
Frat1P70339 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Frat1P70339 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.3■■□□□ 1
Frat1P70339 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Frat1P70339 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Frat1P70339 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Frat1P70339 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.29■■□□□ 1
Frat1P70339 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.29■■□□□ 1
Frat1P70339 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frat1P70339 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.29■■□□□ 1
Frat1P70339 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frat1P70339 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Frat1P70339 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frat1P70339 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Frat1P70339 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Frat1P70339 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frat1P70339 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Frat1P70339 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frat1P70339 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.29■■□□□ 1
Frat1P70339 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.28■■□□□ 1
Frat1P70339 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.28■■□□□ 1
Frat1P70339 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Frat1P70339 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.28■■□□□ 1
Frat1P70339 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.28■■□□□ 1
Frat1P70339 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Frat1P70339 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Frat1P70339 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Frat1P70339 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Frat1P70339 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Frat1P70339 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
Frat1P70339 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Frat1P70339 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Frat1P70339 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.26■□□□□ 0.99
Frat1P70339 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Frat1P70339 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.26■□□□□ 0.99
Frat1P70339 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Frat1P70339 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Frat1P70339 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Frat1P70339 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Frat1P70339 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.26■□□□□ 0.99
Frat1P70339 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frat1P70339 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frat1P70339 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frat1P70339 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frat1P70339 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frat1P70339 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Frat1P70339 Gm14523-201ENSMUST00000117260 558 ntBASIC21.25■□□□□ 0.99
Frat1P70339 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frat1P70339 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Frat1P70339 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Frat1P70339 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frat1P70339 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frat1P70339 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Frat1P70339 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frat1P70339 Grk6-206ENSMUST00000224995 2971 ntBASIC21.24■□□□□ 0.99
Frat1P70339 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frat1P70339 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frat1P70339 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frat1P70339 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frat1P70339 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frat1P70339 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.23■□□□□ 0.99
Frat1P70339 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frat1P70339 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.23■□□□□ 0.99
Frat1P70339 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Frat1P70339 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frat1P70339 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.23■□□□□ 0.99
Frat1P70339 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Frat1P70339 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frat1P70339 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.23■□□□□ 0.99
Frat1P70339 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frat1P70339 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Frat1P70339 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frat1P70339 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Frat1P70339 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.22■□□□□ 0.99
Frat1P70339 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Frat1P70339 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms