Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.29■□□□□ 0.52
CTSDP07339 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.29■□□□□ 0.52
CTSDP07339 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSDP07339 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTSDP07339 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CTSDP07339 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSDP07339 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSDP07339 AC019171.1-201ENST00000601251 1056 ntBASIC18.29■□□□□ 0.52
CTSDP07339 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CTSDP07339 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.29■□□□□ 0.52
CTSDP07339 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CTSDP07339 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.29■□□□□ 0.52
CTSDP07339 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSDP07339 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSDP07339 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.28■□□□□ 0.52
CTSDP07339 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSDP07339 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSDP07339 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSDP07339 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.28■□□□□ 0.52
CTSDP07339 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.28■□□□□ 0.52
CTSDP07339 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSDP07339 AF131216.4-201ENST00000638924 1588 ntBASIC18.28■□□□□ 0.52
CTSDP07339 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSDP07339 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSDP07339 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.28■□□□□ 0.52
CTSDP07339 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSDP07339 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSDP07339 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CTSDP07339 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSDP07339 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.27■□□□□ 0.52
CTSDP07339 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSDP07339 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CTSDP07339 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.27■□□□□ 0.52
CTSDP07339 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CTSDP07339 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSDP07339 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTSDP07339 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTSDP07339 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CTSDP07339 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CTSDP07339 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.26■□□□□ 0.51
CTSDP07339 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSDP07339 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSDP07339 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTSDP07339 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CTSDP07339 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSDP07339 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CTSDP07339 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSDP07339 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.26■□□□□ 0.51
CTSDP07339 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.26■□□□□ 0.51
CTSDP07339 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.26■□□□□ 0.51
CTSDP07339 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.26■□□□□ 0.51
CTSDP07339 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.26■□□□□ 0.51
CTSDP07339 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.26■□□□□ 0.51
CTSDP07339 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSDP07339 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSDP07339 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.26■□□□□ 0.51
CTSDP07339 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSDP07339 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTSDP07339 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSDP07339 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CTSDP07339 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSDP07339 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSDP07339 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSDP07339 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CTSDP07339 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTSDP07339 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CTSDP07339 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.25■□□□□ 0.51
CTSDP07339 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CTSDP07339 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSDP07339 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSDP07339 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSDP07339 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CTSDP07339 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSDP07339 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 AC120024.1-201ENST00000562672 995 ntBASIC18.24■□□□□ 0.51
CTSDP07339 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CTSDP07339 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CTSDP07339 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSDP07339 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSDP07339 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTSDP07339 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CTSDP07339 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSDP07339 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTSDP07339 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSDP07339 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSDP07339 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTSDP07339 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTSDP07339 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.23■□□□□ 0.51
CTSDP07339 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms