Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hps1O08983 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hps1O08983 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hps1O08983 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hps1O08983 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hps1O08983 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hps1O08983 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Hps1O08983 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hps1O08983 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hps1O08983 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hps1O08983 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hps1O08983 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Hps1O08983 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hps1O08983 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.06■□□□□ 0.48
Hps1O08983 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hps1O08983 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hps1O08983 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hps1O08983 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hps1O08983 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Hps1O08983 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hps1O08983 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hps1O08983 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.05■□□□□ 0.48
Hps1O08983 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Hps1O08983 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.05■□□□□ 0.48
Hps1O08983 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Hps1O08983 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.05■□□□□ 0.48
Hps1O08983 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.05■□□□□ 0.48
Hps1O08983 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.05■□□□□ 0.48
Hps1O08983 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hps1O08983 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hps1O08983 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hps1O08983 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Hps1O08983 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.04■□□□□ 0.48
Hps1O08983 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.04■□□□□ 0.48
Hps1O08983 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hps1O08983 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hps1O08983 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hps1O08983 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hps1O08983 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hps1O08983 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hps1O08983 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hps1O08983 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hps1O08983 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hps1O08983 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Hps1O08983 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hps1O08983 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hps1O08983 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hps1O08983 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hps1O08983 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hps1O08983 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hps1O08983 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.02■□□□□ 0.48
Hps1O08983 Gm10399-202ENSMUST00000202768 748 ntBASIC18.02■□□□□ 0.48
Hps1O08983 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.02■□□□□ 0.48
Hps1O08983 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hps1O08983 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.02■□□□□ 0.47
Hps1O08983 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hps1O08983 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hps1O08983 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hps1O08983 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hps1O08983 Gm27454-201ENSMUST00000185090 204 ntBASIC18.01■□□□□ 0.47
Hps1O08983 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hps1O08983 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hps1O08983 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hps1O08983 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hps1O08983 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hps1O08983 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.01■□□□□ 0.47
Hps1O08983 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hps1O08983 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hps1O08983 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18■□□□□ 0.47
Hps1O08983 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hps1O08983 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hps1O08983 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18■□□□□ 0.47
Hps1O08983 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hps1O08983 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18■□□□□ 0.47
Hps1O08983 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Hps1O08983 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hps1O08983 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hps1O08983 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hps1O08983 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hps1O08983 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hps1O08983 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hps1O08983 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hps1O08983 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hps1O08983 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hps1O08983 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hps1O08983 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hps1O08983 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hps1O08983 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 192.7 ms