Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01549A6NIU2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC01549A6NIU2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC01549A6NIU2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01549A6NIU2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC01549A6NIU2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC01549A6NIU2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC01549A6NIU2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01549A6NIU2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC01549A6NIU2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01549A6NIU2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01549A6NIU2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01549A6NIU2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01549A6NIU2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 AC079630.1-202ENST00000618127 1840 ntBASIC15.64■□□□□ 0.09
LINC01549A6NIU2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01549A6NIU2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LINC01549A6NIU2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 AC092667.1-201ENST00000434301 2586 ntBASIC15.62■□□□□ 0.09
LINC01549A6NIU2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 AC026202.3-201ENST00000600805 1127 ntBASIC15.62■□□□□ 0.09
LINC01549A6NIU2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01549A6NIU2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01549A6NIU2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LINC01549A6NIU2 AC026310.3-201ENST00000625186 2373 ntBASIC15.61■□□□□ 0.09
LINC01549A6NIU2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01549A6NIU2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01549A6NIU2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01549A6NIU2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC15.61■□□□□ 0.09
LINC01549A6NIU2 AC007029.1-201ENST00000604183 313 ntBASIC15.61■□□□□ 0.09
LINC01549A6NIU2 RAP2CP1-202ENST00000605179 643 ntBASIC15.61■□□□□ 0.09
LINC01549A6NIU2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01549A6NIU2 CR559946.2-201ENST00000623684 991 ntBASIC15.61■□□□□ 0.09
LINC01549A6NIU2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01549A6NIU2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LINC01549A6NIU2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC01549A6NIU2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC01549A6NIU2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01549A6NIU2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01549A6NIU2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms