Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC126544.1-201ENST00000580842 1059 ntBASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 AP003733.4-201ENST00000623785 1697 ntBASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA3Q9Y5H0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA3Q9Y5H0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
PCDHGA3Q9Y5H0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA3Q9Y5H0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA3Q9Y5H0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA3Q9Y5H0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA3Q9Y5H0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PCDHGA3Q9Y5H0 AC034268.1-201ENST00000441047 882 ntBASIC21.38■■□□□ 1.01
PCDHGA3Q9Y5H0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA3Q9Y5H0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA3Q9Y5H0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA3Q9Y5H0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA3Q9Y5H0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA3Q9Y5H0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA3Q9Y5H0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA3Q9Y5H0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA3Q9Y5H0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGA3Q9Y5H0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA3Q9Y5H0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA3Q9Y5H0 DUSP8P5-201ENST00000422884 1815 ntBASIC21.37■■□□□ 1.01
PCDHGA3Q9Y5H0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDHGA3Q9Y5H0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGA3Q9Y5H0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGA3Q9Y5H0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA3Q9Y5H0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGA3Q9Y5H0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA3Q9Y5H0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA3Q9Y5H0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGA3Q9Y5H0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA3Q9Y5H0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA3Q9Y5H0 YBX1P1-201ENST00000445822 960 ntBASIC21.36■■□□□ 1.01
PCDHGA3Q9Y5H0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.36■■□□□ 1.01
PCDHGA3Q9Y5H0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA3Q9Y5H0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHGA3Q9Y5H0 SLC47A1P1-202ENST00000449666 945 ntBASIC21.35■■□□□ 1.01
PCDHGA3Q9Y5H0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHGA3Q9Y5H0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGA3Q9Y5H0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA3Q9Y5H0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA3Q9Y5H0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA3Q9Y5H0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA3Q9Y5H0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGA3Q9Y5H0 TSPY26P-201ENST00000476365 1326 ntBASIC21.34■■□□□ 1.01
PCDHGA3Q9Y5H0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA3Q9Y5H0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA3Q9Y5H0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGA3Q9Y5H0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHGA3Q9Y5H0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA3Q9Y5H0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGA3Q9Y5H0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA3Q9Y5H0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA3Q9Y5H0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA3Q9Y5H0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PCDHGA3Q9Y5H0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PCDHGA3Q9Y5H0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA3Q9Y5H0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHGA3Q9Y5H0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHGA3Q9Y5H0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PCDHGA3Q9Y5H0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA3Q9Y5H0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHGA3Q9Y5H0 AL358852.1-201ENST00000623174 1268 ntBASIC21.33■■□□□ 1.01
PCDHGA3Q9Y5H0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGA3Q9Y5H0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGA3Q9Y5H0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PCDHGA3Q9Y5H0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms