Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx6Q9R1R0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx6Q9R1R0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx6Q9R1R0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lhx6Q9R1R0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx6Q9R1R0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Lhx6Q9R1R0 Iqck-206ENSMUST00000208658 2891 ntBASIC18.37■□□□□ 0.53
Lhx6Q9R1R0 Gm13168-201ENSMUST00000121771 632 ntBASIC18.37■□□□□ 0.53
Lhx6Q9R1R0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx6Q9R1R0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx6Q9R1R0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Lhx6Q9R1R0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx6Q9R1R0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx6Q9R1R0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx6Q9R1R0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lhx6Q9R1R0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.36■□□□□ 0.53
Lhx6Q9R1R0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx6Q9R1R0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx6Q9R1R0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.36■□□□□ 0.53
Lhx6Q9R1R0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.36■□□□□ 0.53
Lhx6Q9R1R0 AC073947.1-201ENSMUST00000216991 649 ntBASIC18.36■□□□□ 0.53
Lhx6Q9R1R0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx6Q9R1R0 Gm4968-201ENSMUST00000071458 858 ntBASIC18.36■□□□□ 0.53
Lhx6Q9R1R0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx6Q9R1R0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx6Q9R1R0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx6Q9R1R0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx6Q9R1R0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx6Q9R1R0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lhx6Q9R1R0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx6Q9R1R0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx6Q9R1R0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx6Q9R1R0 Mir5133-201ENSMUST00000174955 77 ntBASIC18.34■□□□□ 0.53
Lhx6Q9R1R0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Lhx6Q9R1R0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx6Q9R1R0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx6Q9R1R0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Lhx6Q9R1R0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.33■□□□□ 0.53
Lhx6Q9R1R0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lhx6Q9R1R0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.33■□□□□ 0.52
Lhx6Q9R1R0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx6Q9R1R0 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.33■□□□□ 0.52
Lhx6Q9R1R0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx6Q9R1R0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Lhx6Q9R1R0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Lhx6Q9R1R0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx6Q9R1R0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.33■□□□□ 0.52
Lhx6Q9R1R0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Lhx6Q9R1R0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx6Q9R1R0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.31■□□□□ 0.52
Lhx6Q9R1R0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx6Q9R1R0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx6Q9R1R0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx6Q9R1R0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Lhx6Q9R1R0 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx6Q9R1R0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx6Q9R1R0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx6Q9R1R0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx6Q9R1R0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx6Q9R1R0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Lhx6Q9R1R0 Gm12527-201ENSMUST00000117967 564 ntBASIC18.3■□□□□ 0.52
Lhx6Q9R1R0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.3■□□□□ 0.52
Lhx6Q9R1R0 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.3■□□□□ 0.52
Lhx6Q9R1R0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.3■□□□□ 0.52
Lhx6Q9R1R0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx6Q9R1R0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx6Q9R1R0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.3■□□□□ 0.52
Lhx6Q9R1R0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lhx6Q9R1R0 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.3■□□□□ 0.52
Lhx6Q9R1R0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lhx6Q9R1R0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 136.5 ms