Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC6A20Q9NP91 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
SLC6A20Q9NP91 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC6A20Q9NP91 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SLC6A20Q9NP91 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC6A20Q9NP91 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC6A20Q9NP91 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC6A20Q9NP91 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
SLC6A20Q9NP91 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC6A20Q9NP91 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.31■■□□□ 1
SLC6A20Q9NP91 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.3■■□□□ 1
SLC6A20Q9NP91 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.3■■□□□ 1
SLC6A20Q9NP91 AC004687.1-201ENST00000579003 1625 ntBASIC21.3■■□□□ 1
SLC6A20Q9NP91 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A20Q9NP91 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SLC6A20Q9NP91 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A20Q9NP91 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC6A20Q9NP91 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A20Q9NP91 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.3■■□□□ 1
SLC6A20Q9NP91 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
SLC6A20Q9NP91 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A20Q9NP91 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC6A20Q9NP91 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.3■■□□□ 1
SLC6A20Q9NP91 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A20Q9NP91 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.29■■□□□ 1
SLC6A20Q9NP91 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.29■■□□□ 1
SLC6A20Q9NP91 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.29■■□□□ 1
SLC6A20Q9NP91 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC6A20Q9NP91 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
SLC6A20Q9NP91 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.29■■□□□ 1
SLC6A20Q9NP91 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SLC6A20Q9NP91 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC6A20Q9NP91 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A20Q9NP91 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.28■■□□□ 1
SLC6A20Q9NP91 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A20Q9NP91 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.28■■□□□ 1
SLC6A20Q9NP91 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A20Q9NP91 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A20Q9NP91 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A20Q9NP91 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A20Q9NP91 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.27■■□□□ 1
SLC6A20Q9NP91 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.27■■□□□ 1
SLC6A20Q9NP91 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.27■■□□□ 1
SLC6A20Q9NP91 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A20Q9NP91 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.27■■□□□ 1
SLC6A20Q9NP91 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A20Q9NP91 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC6A20Q9NP91 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC6A20Q9NP91 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.27■□□□□ 0.99
SLC6A20Q9NP91 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
SLC6A20Q9NP91 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A20Q9NP91 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC6A20Q9NP91 AC142381.2-201ENST00000566120 298 ntBASIC21.26■□□□□ 0.99
SLC6A20Q9NP91 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SLC6A20Q9NP91 AL031432.3-201ENST00000607698 485 ntBASIC21.26■□□□□ 0.99
SLC6A20Q9NP91 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A20Q9NP91 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A20Q9NP91 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC6A20Q9NP91 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 AC010525.1-201ENST00000585559 441 ntBASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A20Q9NP91 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 C9orf163-202ENST00000624034 2573 ntBASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 EDA-201ENST00000338901 1233 ntBASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 SLC47A1P1-202ENST00000449666 945 ntBASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 OR2I1P-207ENST00000453522 948 ntBASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A20Q9NP91 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC6A20Q9NP91 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 491.2 ms