Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 pRNA.6-201ENST00000610482 90 ntBASIC19.3■□□□□ 0.68
CDH20Q9HBT6 pRNA.5-201ENST00000612139 90 ntBASIC19.3■□□□□ 0.68
CDH20Q9HBT6 pRNA.11-201ENST00000618423 90 ntBASIC19.3■□□□□ 0.68
CDH20Q9HBT6 pRNA.13-201ENST00000619112 90 ntBASIC19.3■□□□□ 0.68
CDH20Q9HBT6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH20Q9HBT6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.29■□□□□ 0.68
CDH20Q9HBT6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH20Q9HBT6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH20Q9HBT6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CDH20Q9HBT6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH20Q9HBT6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH20Q9HBT6 AC096631.2-201ENST00000436136 790 ntBASIC19.27■□□□□ 0.68
CDH20Q9HBT6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
CDH20Q9HBT6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.27■□□□□ 0.68
CDH20Q9HBT6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.27■□□□□ 0.68
CDH20Q9HBT6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH20Q9HBT6 DUSP8P5-201ENST00000422884 1815 ntBASIC19.27■□□□□ 0.68
CDH20Q9HBT6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.27■□□□□ 0.67
CDH20Q9HBT6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CDH20Q9HBT6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH20Q9HBT6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.27■□□□□ 0.67
CDH20Q9HBT6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH20Q9HBT6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH20Q9HBT6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH20Q9HBT6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH20Q9HBT6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH20Q9HBT6 UNC93B3-201ENST00000308076 687 ntBASIC19.26■□□□□ 0.67
CDH20Q9HBT6 SERBP1P1-201ENST00000396021 1160 ntBASIC19.26■□□□□ 0.67
CDH20Q9HBT6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH20Q9HBT6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH20Q9HBT6 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH20Q9HBT6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH20Q9HBT6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CDH20Q9HBT6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH20Q9HBT6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.25■□□□□ 0.67
CDH20Q9HBT6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 MIR3181-201ENST00000578512 73 ntBASIC19.25■□□□□ 0.67
CDH20Q9HBT6 AL138724.1-201ENST00000606771 1088 ntBASIC19.25■□□□□ 0.67
CDH20Q9HBT6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CDH20Q9HBT6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 DUSP8P3-201ENST00000399571 1760 ntBASIC19.24■□□□□ 0.67
CDH20Q9HBT6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH20Q9HBT6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms