Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Nkx2-4Q9EQM3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nkx2-4Q9EQM3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.44■□□□□ 0.86
Nkx2-4Q9EQM3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Nkx2-4Q9EQM3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-4Q9EQM3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-4Q9EQM3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Gm13146-201ENSMUST00000118508 780 ntBASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Trmt13-210ENSMUST00000198454 880 ntBASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-4Q9EQM3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-4Q9EQM3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-4Q9EQM3 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.42■□□□□ 0.86
Nkx2-4Q9EQM3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.42■□□□□ 0.86
Nkx2-4Q9EQM3 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.42■□□□□ 0.86
Nkx2-4Q9EQM3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-4Q9EQM3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-4Q9EQM3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-4Q9EQM3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-4Q9EQM3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-4Q9EQM3 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.41■□□□□ 0.86
Nkx2-4Q9EQM3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-4Q9EQM3 Gm6211-202ENSMUST00000167849 925 ntBASIC20.41■□□□□ 0.86
Nkx2-4Q9EQM3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.41■□□□□ 0.86
Nkx2-4Q9EQM3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-4Q9EQM3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-4Q9EQM3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-4Q9EQM3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-4Q9EQM3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-4Q9EQM3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-4Q9EQM3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.41■□□□□ 0.86
Nkx2-4Q9EQM3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-4Q9EQM3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-4Q9EQM3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-4Q9EQM3 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.4■□□□□ 0.86
Nkx2-4Q9EQM3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-4Q9EQM3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nkx2-4Q9EQM3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.39■□□□□ 0.85
Nkx2-4Q9EQM3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.39■□□□□ 0.85
Nkx2-4Q9EQM3 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.39■□□□□ 0.85
Nkx2-4Q9EQM3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Nkx2-4Q9EQM3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-4Q9EQM3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-4Q9EQM3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-4Q9EQM3 Gm38205-201ENSMUST00000192243 258 ntBASIC20.38■□□□□ 0.85
Nkx2-4Q9EQM3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-4Q9EQM3 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.38■□□□□ 0.85
Nkx2-4Q9EQM3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-4Q9EQM3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
Nkx2-4Q9EQM3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Nkx2-4Q9EQM3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-4Q9EQM3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.37■□□□□ 0.85
Nkx2-4Q9EQM3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-4Q9EQM3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.37■□□□□ 0.85
Nkx2-4Q9EQM3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-4Q9EQM3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.37■□□□□ 0.85
Nkx2-4Q9EQM3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-4Q9EQM3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-4Q9EQM3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-4Q9EQM3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-4Q9EQM3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.36■□□□□ 0.85
Nkx2-4Q9EQM3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.36■□□□□ 0.85
Nkx2-4Q9EQM3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-4Q9EQM3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-4Q9EQM3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.35■□□□□ 0.85
Nkx2-4Q9EQM3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-4Q9EQM3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-4Q9EQM3 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.35■□□□□ 0.85
Nkx2-4Q9EQM3 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.35■□□□□ 0.85
Nkx2-4Q9EQM3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-4Q9EQM3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-4Q9EQM3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-4Q9EQM3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-4Q9EQM3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Nkx2-4Q9EQM3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.35■□□□□ 0.85
Nkx2-4Q9EQM3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-4Q9EQM3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-4Q9EQM3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Nkx2-4Q9EQM3 Gm13836-201ENSMUST00000121159 501 ntBASIC20.34■□□□□ 0.85
Nkx2-4Q9EQM3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-4Q9EQM3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.34■□□□□ 0.85
Nkx2-4Q9EQM3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-4Q9EQM3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.33■□□□□ 0.85
Nkx2-4Q9EQM3 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.33■□□□□ 0.85
Nkx2-4Q9EQM3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.33■□□□□ 0.85
Nkx2-4Q9EQM3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.33■□□□□ 0.85
Nkx2-4Q9EQM3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-4Q9EQM3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms