Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.78■□□□□ 0.6
Nck1Q99M51 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nck1Q99M51 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.78■□□□□ 0.6
Nck1Q99M51 Gm45444-201ENSMUST00000211394 898 ntBASIC18.78■□□□□ 0.6
Nck1Q99M51 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.78■□□□□ 0.6
Nck1Q99M51 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nck1Q99M51 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nck1Q99M51 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nck1Q99M51 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nck1Q99M51 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nck1Q99M51 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nck1Q99M51 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nck1Q99M51 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Nck1Q99M51 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nck1Q99M51 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nck1Q99M51 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nck1Q99M51 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nck1Q99M51 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nck1Q99M51 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nck1Q99M51 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nck1Q99M51 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nck1Q99M51 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nck1Q99M51 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nck1Q99M51 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.77■□□□□ 0.59
Nck1Q99M51 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nck1Q99M51 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nck1Q99M51 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nck1Q99M51 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nck1Q99M51 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nck1Q99M51 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.76■□□□□ 0.59
Nck1Q99M51 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nck1Q99M51 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nck1Q99M51 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nck1Q99M51 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nck1Q99M51 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nck1Q99M51 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nck1Q99M51 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.76■□□□□ 0.59
Nck1Q99M51 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nck1Q99M51 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nck1Q99M51 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nck1Q99M51 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nck1Q99M51 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nck1Q99M51 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nck1Q99M51 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nck1Q99M51 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nck1Q99M51 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nck1Q99M51 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nck1Q99M51 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nck1Q99M51 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nck1Q99M51 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nck1Q99M51 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nck1Q99M51 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nck1Q99M51 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nck1Q99M51 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nck1Q99M51 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nck1Q99M51 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nck1Q99M51 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nck1Q99M51 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nck1Q99M51 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.73■□□□□ 0.59
Nck1Q99M51 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nck1Q99M51 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.73■□□□□ 0.59
Nck1Q99M51 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nck1Q99M51 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.73■□□□□ 0.59
Nck1Q99M51 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Nck1Q99M51 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nck1Q99M51 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nck1Q99M51 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nck1Q99M51 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nck1Q99M51 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nck1Q99M51 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nck1Q99M51 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.72■□□□□ 0.59
Nck1Q99M51 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nck1Q99M51 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nck1Q99M51 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nck1Q99M51 Gm13238-201ENSMUST00000117655 780 ntBASIC18.72■□□□□ 0.59
Nck1Q99M51 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.72■□□□□ 0.59
Nck1Q99M51 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nck1Q99M51 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nck1Q99M51 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nck1Q99M51 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nck1Q99M51 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nck1Q99M51 Gm10399-202ENSMUST00000202768 748 ntBASIC18.71■□□□□ 0.59
Nck1Q99M51 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.71■□□□□ 0.59
Nck1Q99M51 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nck1Q99M51 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nck1Q99M51 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nck1Q99M51 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.7■□□□□ 0.58
Nck1Q99M51 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nck1Q99M51 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nck1Q99M51 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.69■□□□□ 0.58
Nck1Q99M51 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nck1Q99M51 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nck1Q99M51 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nck1Q99M51 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.69■□□□□ 0.58
Nck1Q99M51 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nck1Q99M51 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Nck1Q99M51 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nck1Q99M51 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nck1Q99M51 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nck1Q99M51 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms