Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdk5rap3Q99LM2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdk5rap3Q99LM2 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.43■□□□□ 0.86
Cdk5rap3Q99LM2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdk5rap3Q99LM2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
Cdk5rap3Q99LM2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdk5rap3Q99LM2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.43■□□□□ 0.86
Cdk5rap3Q99LM2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdk5rap3Q99LM2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdk5rap3Q99LM2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdk5rap3Q99LM2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cdk5rap3Q99LM2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.42■□□□□ 0.86
Cdk5rap3Q99LM2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdk5rap3Q99LM2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.42■□□□□ 0.86
Cdk5rap3Q99LM2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.41■□□□□ 0.86
Cdk5rap3Q99LM2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdk5rap3Q99LM2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdk5rap3Q99LM2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdk5rap3Q99LM2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdk5rap3Q99LM2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdk5rap3Q99LM2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Gm7417-201ENSMUST00000192950 473 ntBASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Cdk5rap3Q99LM2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdk5rap3Q99LM2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdk5rap3Q99LM2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cdk5rap3Q99LM2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdk5rap3Q99LM2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Cdk5rap3Q99LM2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdk5rap3Q99LM2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.39■□□□□ 0.85
Cdk5rap3Q99LM2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdk5rap3Q99LM2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.39■□□□□ 0.85
Cdk5rap3Q99LM2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cdk5rap3Q99LM2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk5rap3Q99LM2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cdk5rap3Q99LM2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk5rap3Q99LM2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.38■□□□□ 0.85
Cdk5rap3Q99LM2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.38■□□□□ 0.85
Cdk5rap3Q99LM2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cdk5rap3Q99LM2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk5rap3Q99LM2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk5rap3Q99LM2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk5rap3Q99LM2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk5rap3Q99LM2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cdk5rap3Q99LM2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk5rap3Q99LM2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk5rap3Q99LM2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk5rap3Q99LM2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.37■□□□□ 0.85
Cdk5rap3Q99LM2 Gm5812-201ENSMUST00000061073 957 ntBASIC20.37■□□□□ 0.85
Cdk5rap3Q99LM2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk5rap3Q99LM2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk5rap3Q99LM2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk5rap3Q99LM2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk5rap3Q99LM2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap3Q99LM2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap3Q99LM2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap3Q99LM2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cdk5rap3Q99LM2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap3Q99LM2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap3Q99LM2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap3Q99LM2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap3Q99LM2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap3Q99LM2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap3Q99LM2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap3Q99LM2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Cdk5rap3Q99LM2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.35■□□□□ 0.85
Cdk5rap3Q99LM2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.35■□□□□ 0.85
Cdk5rap3Q99LM2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk5rap3Q99LM2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk5rap3Q99LM2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cdk5rap3Q99LM2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk5rap3Q99LM2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk5rap3Q99LM2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk5rap3Q99LM2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk5rap3Q99LM2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk5rap3Q99LM2 Etf1-202ENSMUST00000180351 108 ntBASIC20.34■□□□□ 0.85
Cdk5rap3Q99LM2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk5rap3Q99LM2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk5rap3Q99LM2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk5rap3Q99LM2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk5rap3Q99LM2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk5rap3Q99LM2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
Cdk5rap3Q99LM2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.33■□□□□ 0.85
Cdk5rap3Q99LM2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.33■□□□□ 0.85
Cdk5rap3Q99LM2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk5rap3Q99LM2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk5rap3Q99LM2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk5rap3Q99LM2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk5rap3Q99LM2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms