Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TMEFF1Q8IYR6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.14■■□□□ 1.14
TMEFF1Q8IYR6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TMEFF1Q8IYR6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TMEFF1Q8IYR6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TMEFF1Q8IYR6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TMEFF1Q8IYR6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TMEFF1Q8IYR6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TMEFF1Q8IYR6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TMEFF1Q8IYR6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TMEFF1Q8IYR6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TMEFF1Q8IYR6 AC080038.1-201ENST00000611274 1154 ntBASIC22.14■■□□□ 1.13
TMEFF1Q8IYR6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
TMEFF1Q8IYR6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TMEFF1Q8IYR6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TMEFF1Q8IYR6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TMEFF1Q8IYR6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.13■■□□□ 1.13
TMEFF1Q8IYR6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMEFF1Q8IYR6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMEFF1Q8IYR6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.13■■□□□ 1.13
TMEFF1Q8IYR6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMEFF1Q8IYR6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMEFF1Q8IYR6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TMEFF1Q8IYR6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMEFF1Q8IYR6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMEFF1Q8IYR6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMEFF1Q8IYR6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
TMEFF1Q8IYR6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMEFF1Q8IYR6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMEFF1Q8IYR6 LINC01529-204ENST00000636474 1715 ntBASIC22.12■■□□□ 1.13
TMEFF1Q8IYR6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.12■■□□□ 1.13
TMEFF1Q8IYR6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TMEFF1Q8IYR6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
TMEFF1Q8IYR6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TMEFF1Q8IYR6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.12■■□□□ 1.13
TMEFF1Q8IYR6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 AC016769.1-201ENST00000409132 1010 ntBASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 KRT18P61-201ENST00000585825 1298 ntBASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 AP003733.4-201ENST00000623785 1697 ntBASIC22.11■■□□□ 1.13
TMEFF1Q8IYR6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 AC144652.1-201ENST00000609974 1624 ntBASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 AC137761.2-201ENST00000561729 223 ntBASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 AC145350.3-201ENST00000569033 163 ntBASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.1■■□□□ 1.13
TMEFF1Q8IYR6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.09■■□□□ 1.13
TMEFF1Q8IYR6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 AC006015.1-201ENST00000429970 570 ntBASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TMEFF1Q8IYR6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms