Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Alx1Q8C8B0 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.25■■□□□ 1.31
Alx1Q8C8B0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.25■■□□□ 1.31
Alx1Q8C8B0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Alx1Q8C8B0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Alx1Q8C8B0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
Alx1Q8C8B0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Alx1Q8C8B0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Alx1Q8C8B0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Alx1Q8C8B0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Alx1Q8C8B0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Alx1Q8C8B0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Alx1Q8C8B0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Alx1Q8C8B0 AA386476-201ENSMUST00000098781 1665 ntBASIC23.23■■□□□ 1.31
Alx1Q8C8B0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Alx1Q8C8B0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.23■■□□□ 1.31
Alx1Q8C8B0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Alx1Q8C8B0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Alx1Q8C8B0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Alx1Q8C8B0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Alx1Q8C8B0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.23■■□□□ 1.31
Alx1Q8C8B0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Alx1Q8C8B0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Alx1Q8C8B0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Alx1Q8C8B0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Alx1Q8C8B0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Alx1Q8C8B0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.22■■□□□ 1.31
Alx1Q8C8B0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.22■■□□□ 1.31
Alx1Q8C8B0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Alx1Q8C8B0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Alx1Q8C8B0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Alx1Q8C8B0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Alx1Q8C8B0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Alx1Q8C8B0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Alx1Q8C8B0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Alx1Q8C8B0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Alx1Q8C8B0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Alx1Q8C8B0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Alx1Q8C8B0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.2■■□□□ 1.3
Alx1Q8C8B0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Alx1Q8C8B0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Alx1Q8C8B0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Alx1Q8C8B0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC23.2■■□□□ 1.3
Alx1Q8C8B0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Alx1Q8C8B0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Alx1Q8C8B0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Alx1Q8C8B0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Alx1Q8C8B0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Alx1Q8C8B0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Alx1Q8C8B0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Alx1Q8C8B0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Alx1Q8C8B0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Alx1Q8C8B0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Alx1Q8C8B0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Alx1Q8C8B0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Alx1Q8C8B0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Alx1Q8C8B0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Alx1Q8C8B0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Alx1Q8C8B0 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.18■■□□□ 1.3
Alx1Q8C8B0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Alx1Q8C8B0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Alx1Q8C8B0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Alx1Q8C8B0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Alx1Q8C8B0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Alx1Q8C8B0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Alx1Q8C8B0 Gm11421-201ENSMUST00000122124 294 ntBASIC23.17■■□□□ 1.3
Alx1Q8C8B0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Alx1Q8C8B0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Alx1Q8C8B0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
Alx1Q8C8B0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.16■■□□□ 1.3
Alx1Q8C8B0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.16■■□□□ 1.3
Alx1Q8C8B0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Alx1Q8C8B0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Alx1Q8C8B0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Alx1Q8C8B0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Alx1Q8C8B0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Alx1Q8C8B0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Alx1Q8C8B0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Gm43060-201ENSMUST00000200621 289 ntBASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
Alx1Q8C8B0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Alx1Q8C8B0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Alx1Q8C8B0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Alx1Q8C8B0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Alx1Q8C8B0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Alx1Q8C8B0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.14■■□□□ 1.29
Alx1Q8C8B0 Gm40848-201ENSMUST00000221998 324 ntBASIC23.14■■□□□ 1.29
Alx1Q8C8B0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms