Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nop53Q8BK35 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nop53Q8BK35 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.06■□□□□ 0.96
Nop53Q8BK35 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Nop53Q8BK35 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nop53Q8BK35 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.06■□□□□ 0.96
Nop53Q8BK35 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nop53Q8BK35 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nop53Q8BK35 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.06■□□□□ 0.96
Nop53Q8BK35 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nop53Q8BK35 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nop53Q8BK35 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nop53Q8BK35 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nop53Q8BK35 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nop53Q8BK35 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nop53Q8BK35 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.05■□□□□ 0.96
Nop53Q8BK35 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nop53Q8BK35 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nop53Q8BK35 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nop53Q8BK35 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Nop53Q8BK35 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.05■□□□□ 0.96
Nop53Q8BK35 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nop53Q8BK35 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.04■□□□□ 0.96
Nop53Q8BK35 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nop53Q8BK35 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nop53Q8BK35 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nop53Q8BK35 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nop53Q8BK35 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.04■□□□□ 0.96
Nop53Q8BK35 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nop53Q8BK35 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nop53Q8BK35 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nop53Q8BK35 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nop53Q8BK35 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Nop53Q8BK35 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nop53Q8BK35 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nop53Q8BK35 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Nop53Q8BK35 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nop53Q8BK35 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nop53Q8BK35 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nop53Q8BK35 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nop53Q8BK35 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Nop53Q8BK35 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nop53Q8BK35 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nop53Q8BK35 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nop53Q8BK35 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nop53Q8BK35 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.02■□□□□ 0.96
Nop53Q8BK35 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Nop53Q8BK35 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nop53Q8BK35 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nop53Q8BK35 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.01■□□□□ 0.95
Nop53Q8BK35 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.01■□□□□ 0.95
Nop53Q8BK35 Gm15039-201ENSMUST00000118914 875 ntBASIC21.01■□□□□ 0.95
Nop53Q8BK35 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nop53Q8BK35 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nop53Q8BK35 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nop53Q8BK35 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nop53Q8BK35 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21■□□□□ 0.95
Nop53Q8BK35 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nop53Q8BK35 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Nop53Q8BK35 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Nop53Q8BK35 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nop53Q8BK35 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21■□□□□ 0.95
Nop53Q8BK35 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nop53Q8BK35 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Nop53Q8BK35 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21■□□□□ 0.95
Nop53Q8BK35 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nop53Q8BK35 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nop53Q8BK35 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nop53Q8BK35 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Nop53Q8BK35 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nop53Q8BK35 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nop53Q8BK35 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nop53Q8BK35 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.99■□□□□ 0.95
Nop53Q8BK35 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.99■□□□□ 0.95
Nop53Q8BK35 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nop53Q8BK35 Mir6236-201ENSMUST00000184437 123 ntBASIC20.99■□□□□ 0.95
Nop53Q8BK35 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.99■□□□□ 0.95
Nop53Q8BK35 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nop53Q8BK35 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nop53Q8BK35 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Nop53Q8BK35 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nop53Q8BK35 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nop53Q8BK35 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nop53Q8BK35 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nop53Q8BK35 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nop53Q8BK35 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Nop53Q8BK35 Gm22238-201ENSMUST00000175222 88 ntBASIC20.98■□□□□ 0.95
Nop53Q8BK35 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nop53Q8BK35 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Nop53Q8BK35 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nop53Q8BK35 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nop53Q8BK35 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nop53Q8BK35 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
Nop53Q8BK35 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nop53Q8BK35 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nop53Q8BK35 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nop53Q8BK35 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nop53Q8BK35 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nop53Q8BK35 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nop53Q8BK35 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms