Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC34.93■■■■□ 3.18
PPARGC1BQ86YN6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
PPARGC1BQ86YN6 AC092068.2-201ENST00000590491 1708 ntBASIC34.92■■■■□ 3.18
PPARGC1BQ86YN6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC34.92■■■■□ 3.18
PPARGC1BQ86YN6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC34.92■■■■□ 3.18
PPARGC1BQ86YN6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
PPARGC1BQ86YN6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
PPARGC1BQ86YN6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC34.92■■■■□ 3.18
PPARGC1BQ86YN6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC34.92■■■■□ 3.18
PPARGC1BQ86YN6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
PPARGC1BQ86YN6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC34.91■■■■□ 3.18
PPARGC1BQ86YN6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
PPARGC1BQ86YN6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC34.91■■■■□ 3.18
PPARGC1BQ86YN6 C17orf82-201ENST00000623772 1530 ntBASIC34.91■■■■□ 3.18
PPARGC1BQ86YN6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC34.91■■■■□ 3.18
PPARGC1BQ86YN6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
PPARGC1BQ86YN6 AC006455.2-201ENST00000429931 906 ntBASIC34.9■■■■□ 3.18
PPARGC1BQ86YN6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
PPARGC1BQ86YN6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC34.9■■■■□ 3.18
PPARGC1BQ86YN6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
PPARGC1BQ86YN6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC34.89■■■■□ 3.18
PPARGC1BQ86YN6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC34.89■■■■□ 3.18
PPARGC1BQ86YN6 AL117328.2-201ENST00000624617 1940 ntBASIC34.89■■■■□ 3.18
PPARGC1BQ86YN6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC34.89■■■■□ 3.18
PPARGC1BQ86YN6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC34.89■■■■□ 3.18
PPARGC1BQ86YN6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
PPARGC1BQ86YN6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC34.88■■■■□ 3.17
PPARGC1BQ86YN6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC34.88■■■■□ 3.17
PPARGC1BQ86YN6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
PPARGC1BQ86YN6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
PPARGC1BQ86YN6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
PPARGC1BQ86YN6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
PPARGC1BQ86YN6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
PPARGC1BQ86YN6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC34.87■■■■□ 3.17
PPARGC1BQ86YN6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC34.87■■■■□ 3.17
PPARGC1BQ86YN6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC34.87■■■■□ 3.17
PPARGC1BQ86YN6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC34.87■■■■□ 3.17
PPARGC1BQ86YN6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC34.87■■■■□ 3.17
PPARGC1BQ86YN6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
PPARGC1BQ86YN6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC34.87■■■■□ 3.17
PPARGC1BQ86YN6 DUSP8P3-201ENST00000399571 1760 ntBASIC34.86■■■■□ 3.17
PPARGC1BQ86YN6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PPARGC1BQ86YN6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC34.86■■■■□ 3.17
PPARGC1BQ86YN6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC34.86■■■■□ 3.17
PPARGC1BQ86YN6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
PPARGC1BQ86YN6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC34.85■■■■□ 3.17
PPARGC1BQ86YN6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC34.85■■■■□ 3.17
PPARGC1BQ86YN6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC34.85■■■■□ 3.17
PPARGC1BQ86YN6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
PPARGC1BQ86YN6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC34.85■■■■□ 3.17
PPARGC1BQ86YN6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC34.85■■■■□ 3.17
PPARGC1BQ86YN6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC34.85■■■■□ 3.17
PPARGC1BQ86YN6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
PPARGC1BQ86YN6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC34.85■■■■□ 3.17
PPARGC1BQ86YN6 AC144652.1-201ENST00000609974 1624 ntBASIC34.84■■■■□ 3.17
PPARGC1BQ86YN6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
PPARGC1BQ86YN6 AC099791.2-201ENST00000605725 427 ntBASIC34.84■■■■□ 3.17
PPARGC1BQ86YN6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC34.84■■■■□ 3.17
PPARGC1BQ86YN6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC34.84■■■■□ 3.17
PPARGC1BQ86YN6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
PPARGC1BQ86YN6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC34.84■■■■□ 3.17
PPARGC1BQ86YN6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
PPARGC1BQ86YN6 AL136116.3-201ENST00000402907 1138 ntBASIC34.83■■■■□ 3.17
PPARGC1BQ86YN6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC34.83■■■■□ 3.17
PPARGC1BQ86YN6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC34.82■■■■□ 3.17
PPARGC1BQ86YN6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
PPARGC1BQ86YN6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC34.82■■■■□ 3.16
PPARGC1BQ86YN6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.16
PPARGC1BQ86YN6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
PPARGC1BQ86YN6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.16
PPARGC1BQ86YN6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC34.82■■■■□ 3.16
PPARGC1BQ86YN6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC34.82■■■■□ 3.16
PPARGC1BQ86YN6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
PPARGC1BQ86YN6 AL024507.2-201ENST00000606070 2574 ntBASIC34.81■■■■□ 3.16
PPARGC1BQ86YN6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
PPARGC1BQ86YN6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC34.81■■■■□ 3.16
PPARGC1BQ86YN6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
PPARGC1BQ86YN6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
PPARGC1BQ86YN6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
PPARGC1BQ86YN6 C1orf229-201ENST00000623686 2258 ntBASIC34.81■■■■□ 3.16
PPARGC1BQ86YN6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC34.81■■■■□ 3.16
PPARGC1BQ86YN6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC34.81■■■■□ 3.16
PPARGC1BQ86YN6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
PPARGC1BQ86YN6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
PPARGC1BQ86YN6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC34.8■■■■□ 3.16
PPARGC1BQ86YN6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC34.8■■■■□ 3.16
PPARGC1BQ86YN6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC34.8■■■■□ 3.16
PPARGC1BQ86YN6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
PPARGC1BQ86YN6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
PPARGC1BQ86YN6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC34.79■■■■□ 3.16
PPARGC1BQ86YN6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC34.79■■■■□ 3.16
PPARGC1BQ86YN6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
PPARGC1BQ86YN6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC34.79■■■■□ 3.16
PPARGC1BQ86YN6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC34.79■■■■□ 3.16
PPARGC1BQ86YN6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
PPARGC1BQ86YN6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
PPARGC1BQ86YN6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
PPARGC1BQ86YN6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
PPARGC1BQ86YN6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC34.78■■■■□ 3.16
PPARGC1BQ86YN6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC34.78■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms