Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Rpap1Q80TE0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Rpap1Q80TE0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rpap1Q80TE0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC31.03■■■□□ 2.56
Rpap1Q80TE0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC31.03■■■□□ 2.56
Rpap1Q80TE0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rpap1Q80TE0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Rpap1Q80TE0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Rpap1Q80TE0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC31.02■■■□□ 2.56
Rpap1Q80TE0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC31.02■■■□□ 2.56
Rpap1Q80TE0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Rpap1Q80TE0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
Rpap1Q80TE0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Rpap1Q80TE0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC31.02■■■□□ 2.56
Rpap1Q80TE0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Rpap1Q80TE0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Rpap1Q80TE0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Rpap1Q80TE0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
Rpap1Q80TE0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Rpap1Q80TE0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC31.01■■■□□ 2.55
Rpap1Q80TE0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC31.01■■■□□ 2.55
Rpap1Q80TE0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Rpap1Q80TE0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC31.01■■■□□ 2.55
Rpap1Q80TE0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC31.01■■■□□ 2.55
Rpap1Q80TE0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Rpap1Q80TE0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC31.01■■■□□ 2.55
Rpap1Q80TE0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Rpap1Q80TE0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC31.01■■■□□ 2.55
Rpap1Q80TE0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC31.01■■■□□ 2.55
Rpap1Q80TE0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC31■■■□□ 2.55
Rpap1Q80TE0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC31■■■□□ 2.55
Rpap1Q80TE0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC31■■■□□ 2.55
Rpap1Q80TE0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
Rpap1Q80TE0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
Rpap1Q80TE0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC31■■■□□ 2.55
Rpap1Q80TE0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Rpap1Q80TE0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
Rpap1Q80TE0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Rpap1Q80TE0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC30.98■■■□□ 2.55
Rpap1Q80TE0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Rpap1Q80TE0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Rpap1Q80TE0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Rpap1Q80TE0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Rpap1Q80TE0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Gm8520-201ENSMUST00000186517 868 ntBASIC30.97■■■□□ 2.55
Rpap1Q80TE0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Gm5408-201ENSMUST00000197998 747 ntBASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Gm26766-202ENSMUST00000227544 2347 ntBASIC30.97■■■□□ 2.55
Rpap1Q80TE0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Rpap1Q80TE0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Rpap1Q80TE0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC30.96■■■□□ 2.55
Rpap1Q80TE0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Rpap1Q80TE0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Rpap1Q80TE0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Rpap1Q80TE0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
Rpap1Q80TE0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
Rpap1Q80TE0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.54
Rpap1Q80TE0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC30.95■■■□□ 2.54
Rpap1Q80TE0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
Rpap1Q80TE0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC30.94■■■□□ 2.54
Rpap1Q80TE0 Gm38205-201ENSMUST00000192243 258 ntBASIC30.94■■■□□ 2.54
Rpap1Q80TE0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Rpap1Q80TE0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Rpap1Q80TE0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Rpap1Q80TE0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Rpap1Q80TE0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC30.93■■■□□ 2.54
Rpap1Q80TE0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Rpap1Q80TE0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Rpap1Q80TE0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Rpap1Q80TE0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Rpap1Q80TE0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Rpap1Q80TE0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
Rpap1Q80TE0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Rpap1Q80TE0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Rpap1Q80TE0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Rpap1Q80TE0 Gm7290-201ENSMUST00000104990 617 ntBASIC30.91■■■□□ 2.54
Rpap1Q80TE0 Gm12918-201ENSMUST00000120234 636 ntBASIC30.91■■■□□ 2.54
Rpap1Q80TE0 Gm15710-201ENSMUST00000121821 636 ntBASIC30.91■■■□□ 2.54
Rpap1Q80TE0 Gm5075-201ENSMUST00000196916 622 ntBASIC30.91■■■□□ 2.54
Rpap1Q80TE0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC30.91■■■□□ 2.54
Rpap1Q80TE0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Rpap1Q80TE0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC30.91■■■□□ 2.54
Rpap1Q80TE0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC30.91■■■□□ 2.54
Rpap1Q80TE0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
Rpap1Q80TE0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Rpap1Q80TE0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Rpap1Q80TE0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
Rpap1Q80TE0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC30.9■■■□□ 2.54
Rpap1Q80TE0 Gm20049-201ENSMUST00000219950 730 ntBASIC30.9■■■□□ 2.54
Rpap1Q80TE0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC30.9■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 156.9 ms