Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl3Q6P1Y1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rtl3Q6P1Y1 Gm43173-201ENSMUST00000202246 593 ntBASIC20.4■□□□□ 0.86
Rtl3Q6P1Y1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.4■□□□□ 0.86
Rtl3Q6P1Y1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl3Q6P1Y1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.4■□□□□ 0.86
Rtl3Q6P1Y1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl3Q6P1Y1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl3Q6P1Y1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl3Q6P1Y1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtl3Q6P1Y1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.39■□□□□ 0.86
Rtl3Q6P1Y1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtl3Q6P1Y1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtl3Q6P1Y1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Rtl3Q6P1Y1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtl3Q6P1Y1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Rtl3Q6P1Y1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.39■□□□□ 0.85
Rtl3Q6P1Y1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtl3Q6P1Y1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtl3Q6P1Y1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtl3Q6P1Y1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.37■□□□□ 0.85
Rtl3Q6P1Y1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
Rtl3Q6P1Y1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl3Q6P1Y1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl3Q6P1Y1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl3Q6P1Y1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl3Q6P1Y1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl3Q6P1Y1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl3Q6P1Y1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl3Q6P1Y1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.36■□□□□ 0.85
Rtl3Q6P1Y1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl3Q6P1Y1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
Rtl3Q6P1Y1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl3Q6P1Y1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.34■□□□□ 0.85
Rtl3Q6P1Y1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.34■□□□□ 0.85
Rtl3Q6P1Y1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtl3Q6P1Y1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.34■□□□□ 0.85
Rtl3Q6P1Y1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtl3Q6P1Y1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtl3Q6P1Y1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtl3Q6P1Y1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rtl3Q6P1Y1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rtl3Q6P1Y1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.33■□□□□ 0.85
Rtl3Q6P1Y1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rtl3Q6P1Y1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Rtl3Q6P1Y1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rtl3Q6P1Y1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rtl3Q6P1Y1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtl3Q6P1Y1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rtl3Q6P1Y1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms