Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Gm43017-201ENSMUST00000198296 752 ntBASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retreg2Q6NS82 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg2Q6NS82 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Retreg2Q6NS82 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg2Q6NS82 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg2Q6NS82 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Retreg2Q6NS82 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg2Q6NS82 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Retreg2Q6NS82 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg2Q6NS82 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Retreg2Q6NS82 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.14■□□□□ 0.98
Retreg2Q6NS82 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.14■□□□□ 0.98
Retreg2Q6NS82 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retreg2Q6NS82 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retreg2Q6NS82 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retreg2Q6NS82 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retreg2Q6NS82 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Retreg2Q6NS82 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retreg2Q6NS82 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retreg2Q6NS82 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retreg2Q6NS82 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retreg2Q6NS82 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retreg2Q6NS82 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retreg2Q6NS82 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retreg2Q6NS82 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retreg2Q6NS82 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.12■□□□□ 0.97
Retreg2Q6NS82 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.12■□□□□ 0.97
Retreg2Q6NS82 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retreg2Q6NS82 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg2Q6NS82 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg2Q6NS82 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
Retreg2Q6NS82 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg2Q6NS82 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.11■□□□□ 0.97
Retreg2Q6NS82 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg2Q6NS82 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg2Q6NS82 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Retreg2Q6NS82 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Retreg2Q6NS82 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg2Q6NS82 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Retreg2Q6NS82 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg2Q6NS82 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg2Q6NS82 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg2Q6NS82 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg2Q6NS82 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Retreg2Q6NS82 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg2Q6NS82 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg2Q6NS82 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg2Q6NS82 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg2Q6NS82 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg2Q6NS82 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Retreg2Q6NS82 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg2Q6NS82 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.09■□□□□ 0.97
Retreg2Q6NS82 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.09■□□□□ 0.97
Retreg2Q6NS82 Golph3-202ENSMUST00000226517 2359 ntBASIC21.09■□□□□ 0.97
Retreg2Q6NS82 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.09■□□□□ 0.97
Retreg2Q6NS82 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg2Q6NS82 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Retreg2Q6NS82 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg2Q6NS82 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg2Q6NS82 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg2Q6NS82 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retreg2Q6NS82 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retreg2Q6NS82 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retreg2Q6NS82 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retreg2Q6NS82 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retreg2Q6NS82 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Retreg2Q6NS82 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.08■□□□□ 0.96
Retreg2Q6NS82 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
Retreg2Q6NS82 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retreg2Q6NS82 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retreg2Q6NS82 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.08■□□□□ 0.96
Retreg2Q6NS82 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retreg2Q6NS82 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retreg2Q6NS82 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retreg2Q6NS82 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.07■□□□□ 0.96
Retreg2Q6NS82 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retreg2Q6NS82 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retreg2Q6NS82 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Retreg2Q6NS82 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.07■□□□□ 0.96
Retreg2Q6NS82 Gm8493-201ENSMUST00000196881 489 ntBASIC21.07■□□□□ 0.96
Retreg2Q6NS82 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.07■□□□□ 0.96
Retreg2Q6NS82 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Retreg2Q6NS82 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.07■□□□□ 0.96
Retreg2Q6NS82 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retreg2Q6NS82 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retreg2Q6NS82 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retreg2Q6NS82 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.06■□□□□ 0.96
Retreg2Q6NS82 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms