Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim43aQ3TL54 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim43aQ3TL54 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim43aQ3TL54 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim43aQ3TL54 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.89■□□□□ 0.93
Trim43aQ3TL54 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.89■□□□□ 0.93
Trim43aQ3TL54 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43aQ3TL54 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43aQ3TL54 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43aQ3TL54 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43aQ3TL54 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43aQ3TL54 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Trim43aQ3TL54 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43aQ3TL54 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.88■□□□□ 0.93
Trim43aQ3TL54 Gm45102-201ENSMUST00000207427 857 ntBASIC20.88■□□□□ 0.93
Trim43aQ3TL54 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43aQ3TL54 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim43aQ3TL54 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43aQ3TL54 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43aQ3TL54 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.87■□□□□ 0.93
Trim43aQ3TL54 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43aQ3TL54 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim43aQ3TL54 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim43aQ3TL54 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim43aQ3TL54 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43aQ3TL54 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43aQ3TL54 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trim43aQ3TL54 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43aQ3TL54 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43aQ3TL54 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43aQ3TL54 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43aQ3TL54 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43aQ3TL54 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43aQ3TL54 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43aQ3TL54 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43aQ3TL54 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43aQ3TL54 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43aQ3TL54 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43aQ3TL54 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim43aQ3TL54 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.85■□□□□ 0.93
Trim43aQ3TL54 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43aQ3TL54 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43aQ3TL54 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43aQ3TL54 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43aQ3TL54 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43aQ3TL54 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43aQ3TL54 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Trim43aQ3TL54 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43aQ3TL54 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.84■□□□□ 0.93
Trim43aQ3TL54 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43aQ3TL54 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43aQ3TL54 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim43aQ3TL54 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim43aQ3TL54 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43aQ3TL54 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43aQ3TL54 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43aQ3TL54 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43aQ3TL54 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43aQ3TL54 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43aQ3TL54 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim43aQ3TL54 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43aQ3TL54 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43aQ3TL54 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43aQ3TL54 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43aQ3TL54 Golph3-205ENSMUST00000228671 2842 ntBASIC20.82■□□□□ 0.92
Trim43aQ3TL54 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43aQ3TL54 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43aQ3TL54 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43aQ3TL54 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43aQ3TL54 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43aQ3TL54 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43aQ3TL54 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43aQ3TL54 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43aQ3TL54 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim43aQ3TL54 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Trim43aQ3TL54 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trim43aQ3TL54 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Trim43aQ3TL54 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43aQ3TL54 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43aQ3TL54 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43aQ3TL54 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43aQ3TL54 Mir6236-201ENSMUST00000184437 123 ntBASIC20.8■□□□□ 0.92
Trim43aQ3TL54 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43aQ3TL54 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43aQ3TL54 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43aQ3TL54 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43aQ3TL54 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim43aQ3TL54 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43aQ3TL54 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim43aQ3TL54 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43aQ3TL54 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.79■□□□□ 0.92
Trim43aQ3TL54 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim43aQ3TL54 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43aQ3TL54 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43aQ3TL54 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.79■□□□□ 0.92
Trim43aQ3TL54 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim43aQ3TL54 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43aQ3TL54 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim43aQ3TL54 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43aQ3TL54 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms