Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn6Q03958 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn6Q03958 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn6Q03958 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.75■□□□□ 0.75
Pfdn6Q03958 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.75■□□□□ 0.75
Pfdn6Q03958 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn6Q03958 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn6Q03958 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn6Q03958 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn6Q03958 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn6Q03958 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pfdn6Q03958 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pfdn6Q03958 Gm12922-201ENSMUST00000120626 809 ntBASIC19.74■□□□□ 0.75
Pfdn6Q03958 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pfdn6Q03958 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pfdn6Q03958 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pfdn6Q03958 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pfdn6Q03958 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pfdn6Q03958 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pfdn6Q03958 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pfdn6Q03958 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pfdn6Q03958 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pfdn6Q03958 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.73■□□□□ 0.75
Pfdn6Q03958 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pfdn6Q03958 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Pfdn6Q03958 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pfdn6Q03958 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pfdn6Q03958 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pfdn6Q03958 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
Pfdn6Q03958 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.73■□□□□ 0.75
Pfdn6Q03958 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.73■□□□□ 0.75
Pfdn6Q03958 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pfdn6Q03958 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pfdn6Q03958 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pfdn6Q03958 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.72■□□□□ 0.75
Pfdn6Q03958 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.72■□□□□ 0.75
Pfdn6Q03958 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pfdn6Q03958 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.72■□□□□ 0.75
Pfdn6Q03958 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pfdn6Q03958 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pfdn6Q03958 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pfdn6Q03958 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Pfdn6Q03958 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pfdn6Q03958 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pfdn6Q03958 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.71■□□□□ 0.75
Pfdn6Q03958 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn6Q03958 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn6Q03958 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn6Q03958 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn6Q03958 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn6Q03958 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn6Q03958 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn6Q03958 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn6Q03958 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn6Q03958 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn6Q03958 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Golgb1-201ENSMUST00000023534 498 ntBASIC19.69■□□□□ 0.74
Pfdn6Q03958 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pfdn6Q03958 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.69■□□□□ 0.74
Pfdn6Q03958 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Pfdn6Q03958 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.68■□□□□ 0.74
Pfdn6Q03958 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn6Q03958 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn6Q03958 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn6Q03958 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn6Q03958 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pfdn6Q03958 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn6Q03958 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn6Q03958 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn6Q03958 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn6Q03958 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms